Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 Z99916.2-201ENST00000604037 246 ntBASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 AC127496.7-201ENST00000625110 1798 ntBASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CCDC187A0A096LP49 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 AC073912.3-201ENST00000624414 853 ntBASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC187A0A096LP49 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 SNORA78-201ENST00000459373 127 ntBASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC187A0A096LP49 AC080038.3-201ENST00000623346 1952 ntBASIC19.64■□□□□ 0.74
CCDC187A0A096LP49 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC187A0A096LP49 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC187A0A096LP49 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CCDC187A0A096LP49 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 AC116050.2-201ENST00000612102 1779 ntBASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 C9orf163-202ENST00000624034 2573 ntBASIC19.64■□□□□ 0.73
CCDC187A0A096LP49 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC187A0A096LP49 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms