Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AP004607.4-201ENST00000530158 1459 ntBASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 AIRN-201ENST00000601203 4374 ntBASIC16.22■□□□□ 0.19
TRAV30A0A087WSZ9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 AL139246.5-201ENST00000606645 996 ntBASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV30A0A087WSZ9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV30A0A087WSZ9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV30A0A087WSZ9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV30A0A087WSZ9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.21■□□□□ 0.18
TRAV30A0A087WSZ9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 POU5F1P4-201ENST00000413175 1085 ntBASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 SUDS3P1-201ENST00000505831 966 ntBASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 AL031432.3-201ENST00000607698 485 ntBASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV30A0A087WSZ9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV30A0A087WSZ9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV30A0A087WSZ9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms