Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ASB15-201ENST00000275699 2706 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 TUBB-208ENST00000396389 2903 ntTSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 HHAT-207ENST00000541565 3164 ntTSL 2 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 ALDH1L1-203ENST00000393434 3277 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 LINC00886-201ENST00000472943 3306 ntTSL 2 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 FOXN4-201ENST00000299162 3350 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AL137186.2-201ENST00000397264 3486 ntTSL 3 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 MAOA-201ENST00000338702 4015 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AK3-204ENST00000611749 4029 ntTSL 4 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 KCNH6-205ENST00000583023 3821 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 ADCY10P1-202ENST00000457653 3785 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 ANO10-201ENST00000292246 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 KCNH5-203ENST00000394968 2490 ntTSL 2 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 SLC7A7-204ENST00000397532 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AL807761.4-201ENST00000439901 2277 ntTSL 2 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AC243967.3-201ENST00000614316 2265 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 IK-201ENST00000417647 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 THPO-201ENST00000204615 1855 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 FSD1L-207ENST00000484973 1711 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 CATSPER2P1-204ENST00000439564 1579 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AC087203.3-201ENST00000602981 1547 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 MAGEB17-202ENST00000400004 1434 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 SEC22C-201ENST00000264454 1380 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 H2AFY-215ENST00000510038 1314 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 ZNF410-219ENST00000556797 1311 ntTSL 2 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 SLAMF1-201ENST00000235739 883 ntTSL 5 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 IGHV1-46-201ENST00000390622 655 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AL391416.1-201ENST00000403475 994 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AL592486.1-201ENST00000418343 1220 ntTSL 2 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 Z83839.1-201ENST00000423412 630 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 LINC01715-202ENST00000427804 688 ntTSL 5 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AL445072.1-201ENST00000438994 639 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 APCDD1L-AS1-205ENST00000439558 648 ntTSL 5 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 OR6L1P-201ENST00000441446 910 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AL662795.1-201ENST00000448756 634 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AL355497.2-201ENST00000456346 880 ntTSL 5 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 PPIAP16-201ENST00000462517 487 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 HSD17B7P2-201ENST00000471365 1033 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 HNRNPA1P23-201ENST00000491091 1133 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 SNRPCP17-201ENST00000520330 205 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AC105031.2-201ENST00000522123 814 ntTSL 3 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AC068733.1-201ENST00000532430 1288 ntTSL 2 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 SRSF5-204ENST00000553548 526 ntTSL 4 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 MT1JP-202ENST00000563395 408 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AP001005.2-201ENST00000575066 763 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 MIR2467-201ENST00000584559 81 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AC093107.2-201ENST00000603668 445 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AL161911.2-201ENST00000603920 371 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AP000769.3-201ENST00000622944 536 ntTSL 3 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 SERPINB11-208ENST00000623262 918 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 CU633904.2-201ENST00000624595 879 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 PPP1R12B-218ENST00000634903 878 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AC004156.1-201ENST00000591866 3319 ntTSL 2 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 AC016168.3-201ENST00000625040 3246 ntBASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 DNM1P35-201ENST00000501931 3188 ntTSL 2 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 EPB41L2-216ENST00000527411 4186 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 CSGALNACT1-201ENST00000332246 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 NUTM1-201ENST00000333756 3795 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 PLS1-202ENST00000457734 3706 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 SLC22A14-201ENST00000273173 2202 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 OTUD6B-205ENST00000615618 3434 ntTSL 2 BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 POTEA-202ENST00000522175 1931 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
NPIPA3F8WFD2 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 RBM48-201ENST00000265732 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 PLAGL1-203ENST00000367571 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 TUBA1C-202ENST00000541364 1695 ntTSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 PIN4-204ENST00000423432 1605 ntTSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 STX16-206ENST00000371132 4552 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 ALDH7A1-231ENST00000637206 2466 ntTSL 5 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 CX3CL1-202ENST00000563383 3313 ntTSL 5 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AL121929.2-201ENST00000609691 1432 ntBASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 ZFP1-202ENST00000393430 3250 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 ATXN1L-201ENST00000427980 7886 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 SEMA4A-201ENST00000355014 3137 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 LINC01854-201ENST00000375987 2213 ntTSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 CPVL-203ENST00000409850 2213 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 DEPDC5-204ENST00000400246 5551 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 RN7SKP231-201ENST00000363281 277 ntBASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 SPP2-202ENST00000373368 860 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 SRSF10-206ENST00000374453 866 ntTSL 5 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 LY6G6E-225ENST00000383418 383 ntAPPRIS P5 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 280 ms