Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GNAT2-201ENST00000351050 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 ZNF726-206ENST00000594466 2473 ntTSL 5 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 ARHGEF3-202ENST00000338458 3639 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 GABRB3-201ENST00000299267 4494 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 DNAJB7-201ENST00000307221 2578 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 CTNND2-205ENST00000503622 2982 ntTSL 2 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 ZNF613-202ENST00000391794 2225 ntTSL 2 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 HAVCR1-206ENST00000625904 1807 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 LARS2-201ENST00000265537 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 GEMIN2-202ENST00000308317 1420 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 AL121929.2-201ENST00000609691 1432 ntBASIC8.96□□□□□ -0.98
SNX18Q96RF0 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 ZNF195-207ENST00000429541 2389 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 EXOSC10-202ENST00000376936 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 LINC01555-201ENST00000370624 2884 ntTSL 2 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 LIAS-203ENST00000381846 1578 ntTSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 RPE-206ENST00000429921 2511 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 XRCC6P4-201ENST00000518193 2067 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 AL096869.3-201ENST00000567837 2626 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 AL022100.1-201ENST00000636624 1678 ntTSL 5 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 AC100827.3-201ENST00000566291 2155 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 AC243967.3-201ENST00000614316 2265 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 ALOX12P2-210ENST00000574727 4326 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 RMRP-202ENST00000363046 264 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 CLRN3-201ENST00000368671 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 ZNF684-202ENST00000372697 1028 ntTSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 TRDV2-201ENST00000390469 520 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 RN7SKP54-201ENST00000410704 269 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 RN7SKP120-201ENST00000410761 341 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 AL121748.1-201ENST00000414308 552 ntTSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 ANKRD44-IT1-201ENST00000428191 1069 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 PPP1R2P1-210ENST00000429032 618 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 MIR205HG-203ENST00000429156 990 ntTSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 LINC01282-201ENST00000431646 880 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 AL359555.1-201ENST00000437016 806 ntTSL 2 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 LY86-AS1-203ENST00000447858 938 ntTSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 AL049564.1-201ENST00000449099 825 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 AC093714.1-201ENST00000470532 1257 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 RPL12P38-201ENST00000471280 490 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 GUSBP2-203ENST00000492832 801 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 AC099487.1-201ENST00000501405 391 ntTSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 AP002784.1-201ENST00000506309 546 ntTSL 4 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 AC097501.1-201ENST00000512911 658 ntTSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 SNORA76.1-201ENST00000516313 135 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 RNA5SP414-201ENST00000516580 136 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 HOXA-AS2-206ENST00000521159 800 ntTSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 AP003692.1-201ENST00000521706 796 ntTSL 5 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 AC025419.1-209ENST00000544557 854 ntTSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 MRPL2P1-201ENST00000546688 919 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 AC010203.1-201ENST00000548404 928 ntTSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 BEST3-210ENST00000551160 721 ntTSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 AL358335.1-201ENST00000555388 1066 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 BNIP3P34-201ENST00000600724 572 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 AC132216.1-201ENST00000610375 1158 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 NOP16-208ENST00000616685 472 ntTSL 3 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 BSNDP2-201ENST00000621945 366 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 MIR6880-201ENST00000622851 62 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 AL662791.5-202ENST00000623946 461 ntTSL 2 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 AP006248.5-201ENST00000624786 421 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 SRP9-205ENST00000626563 329 ntTSL 5 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 AL034417.3-201ENST00000641100 1043 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 ATG4A-203ENST00000372232 2315 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 TBC1D3P1-DHX40P1-201ENST00000587125 1841 ntTSL 2 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 Z82206.1-201ENST00000424496 1322 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 COL6A3-204ENST00000392003 3464 ntTSL 2 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 STAT6-201ENST00000300134 4034 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 CDH26-201ENST00000244049 1931 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 ENTPD1-203ENST00000371207 1903 ntTSL 2 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 HSPA8P8-201ENST00000419827 1942 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 ISX-202ENST00000404699 3094 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 ZNF750-201ENST00000269394 3713 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 NUMA1-201ENST00000351960 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 ARHGEF26-205ENST00000496710 3781 ntTSL 2 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 UVSSA-201ENST00000324803 4441 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 AL513122.1-201ENST00000455437 1463 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 IKZF3-216ENST00000583368 1456 ntTSL 2 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 CRX-201ENST00000221996 4470 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 AL035071.1-201ENST00000569087 2131 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 ASH2LP2-201ENST00000453999 1561 ntBASIC8.95□□□□□ -0.98
SNX18Q96RF0 PCDH11Y-202ENST00000333703 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SNX18Q96RF0 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
SNX18Q96RF0 C3P1-201ENST00000495140 3526 ntTSL 5 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 GRIK1-207ENST00000399914 3624 ntTSL 5 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms