Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 TRIM16-211ENST00000577886 1979 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 AC007638.2-201ENST00000574716 1740 ntTSL 2 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 PAK6-201ENST00000260404 3865 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 APTX-205ENST00000379819 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 CCL21-201ENST00000259607 852 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 AL669983.1-201ENST00000306634 318 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 RNU4-8P-201ENST00000364936 141 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 VSTM1-203ENST00000376626 922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 AC008267.2-201ENST00000411606 981 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 LINC00694-201ENST00000416124 729 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 ROBO2P1-201ENST00000422054 288 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 RDH11-202ENST00000428130 1064 ntTSL 2 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 METTL11B-202ENST00000439373 992 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 LINC00395-201ENST00000444536 406 ntTSL 3 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 UBQLN4P2-201ENST00000446233 948 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 KIAA1456-202ENST00000447063 983 ntTSL 2 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 AC069285.1-201ENST00000450891 419 ntTSL 3 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 PHBP12-201ENST00000453979 811 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 AL020994.1-201ENST00000454387 578 ntTSL 4 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 RPS10P7-202ENST00000482594 494 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 AC025171.2-202ENST00000505541 402 ntTSL 5 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 AC133555.1-201ENST00000546408 259 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 AC090907.1-201ENST00000558979 491 ntTSL 3 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 RBMX-207ENST00000562646 2148 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 FOXC2-AS1-201ENST00000563280 319 ntTSL 3 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 AC008731.1-201ENST00000568895 579 ntTSL 3 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 LITAF-207ENST00000571459 677 ntTSL 5 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 ZNF546-204ENST00000596894 714 ntTSL 3 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 AP006545.2-201ENST00000607091 461 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 AL359091.3-201ENST00000609315 573 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 Metazoa_SRP.149-201ENST00000613165 297 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 AL117335.1-201ENST00000620919 678 ntTSL 3 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 U1.30-201ENST00000622285 165 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 SMG6-IT1-201ENST00000624930 374 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 NBPF22P-202ENST00000590707 1580 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 AC069547.1-201ENST00000624562 1586 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 ANKRD66-202ENST00000565422 1346 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 PTPRD-207ENST00000463477 1697 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 AL158071.4-201ENST00000608358 4125 ntBASIC8.97□□□□□ -0.97
SNX18Q96RF0 TSGA10-203ENST00000393483 3878 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 DKK2-201ENST00000285311 3638 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 AL157712.1-201ENST00000620178 2055 ntBASIC8.96□□□□□ -0.97
SNX18Q96RF0 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SNX18Q96RF0 TDRD1-203ENST00000369282 3705 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
SNX18Q96RF0 LINC02181-201ENST00000430050 4083 ntTSL 2 BASIC8.96□□□□□ -0.97
SNX18Q96RF0 CCNC-203ENST00000369220 2118 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SNX18Q96RF0 OR6B2-201ENST00000402971 1492 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
SNX18Q96RF0 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.97
SNX18Q96RF0 PNLIPRP1-214ENST00000528052 1533 ntAPPRIS P2 TSL 2 BASIC8.96□□□□□ -0.97
SNX18Q96RF0 WIPF2-207ENST00000583130 1529 ntAPPRIS P2 TSL 2 BASIC8.96□□□□□ -0.97
SNX18Q96RF0 CD59-203ENST00000415002 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SNX18Q96RF0 AC105105.1-201ENST00000591360 2553 ntTSL 2 BASIC8.96□□□□□ -0.97
SNX18Q96RF0 KIR3DX1-205ENST00000610811 3325 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
SNX18Q96RF0 OR2W5-203ENST00000641857 1597 ntBASIC8.96□□□□□ -0.97
SNX18Q96RF0 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SNX18Q96RF0 AL121832.3-201ENST00000616512 3700 ntBASIC8.96□□□□□ -0.97
SNX18Q96RF0 KIF9-202ENST00000335044 3357 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SNX18Q96RF0 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SNX18Q96RF0 CCDC136-201ENST00000297788 4169 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 IL2RA-201ENST00000256876 1006 ntTSL 5 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 SNF8-201ENST00000290330 951 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 OR2AG1-201ENST00000307401 998 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 MYL4-201ENST00000354968 907 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 IGHV3-38-201ENST00000390618 426 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 AL592043.1-201ENST00000412652 526 ntTSL 3 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 OR11M1P-201ENST00000415975 895 ntBASIC8.96□□□□□ -0.98
SNX18Q96RF0 NDUFB4P3-201ENST00000418418 390 ntBASIC8.96□□□□□ -0.98
SNX18Q96RF0 RBMY2WP-201ENST00000424230 894 ntBASIC8.96□□□□□ -0.98
SNX18Q96RF0 AL445490.1-201ENST00000430683 489 ntTSL 3 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 RNASE11-204ENST00000432835 946 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 NPIPB7-201ENST00000435324 1266 ntAPPRIS P5 TSL 5 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 MED6-203ENST00000440435 931 ntTSL 2 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 RBMY2XP-201ENST00000447471 895 ntBASIC8.96□□□□□ -0.98
SNX18Q96RF0 HNF4A-AS1-201ENST00000452481 648 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 PHBP13-201ENST00000453244 760 ntBASIC8.96□□□□□ -0.98
SNX18Q96RF0 LAMTOR4-203ENST00000460732 616 ntTSL 3 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 AC034206.1-202ENST00000514446 634 ntTSL 3 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 DLG2-228ENST00000530800 566 ntTSL 4 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 RPL38-207ENST00000534490 429 ntAPPRIS ALT1 TSL 2 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 LYSMD2-203ENST00000558126 775 ntTSL 5 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 STX1B-202ENST00000565419 834 ntTSL 2 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 AL356740.3-201ENST00000598534 649 ntBASIC8.96□□□□□ -0.98
SNX18Q96RF0 STAG3L3-206ENST00000608210 1067 ntBASIC8.96□□□□□ -0.98
SNX18Q96RF0 AC091167.6-201ENST00000610689 413 ntBASIC8.96□□□□□ -0.98
SNX18Q96RF0 MIR6511B2-201ENST00000636908 71 ntBASIC8.96□□□□□ -0.98
SNX18Q96RF0 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 TPK1-201ENST00000360057 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 FCRLA-208ENST00000367953 2066 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SNX18Q96RF0 AL354732.1-201ENST00000416416 2080 ntTSL 5 BASIC8.96□□□□□ -0.98
SNX18Q96RF0 SPG21-209ENST00000559199 2059 ntTSL 2 BASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms