Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FTX-215ENST00000638681 9771 ntTSL 5 BASIC8.94□□□□□ -0.98
P04436 MEF2C-203ENST00000437473 4340 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
P04436 CHODL-202ENST00000338326 1974 ntTSL 5 BASIC8.93□□□□□ -0.98
P04436 MMP19-201ENST00000322569 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 DDX11-201ENST00000228264 3717 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 WDR20-204ENST00000342702 2391 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 ANO10-201ENST00000292246 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 GAD1-202ENST00000358196 3604 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 NDUFB3-201ENST00000237889 755 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 ARL5C-201ENST00000269586 540 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
P04436 HBE1-201ENST00000292896 827 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 DMRTC1B-202ENST00000373532 1100 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 AL136968.1-201ENST00000403053 946 ntBASIC8.93□□□□□ -0.98
P04436 LINC00159-201ENST00000411605 438 ntTSL 3 BASIC8.93□□□□□ -0.98
P04436 AC084851.3-201ENST00000432771 573 ntBASIC8.93□□□□□ -0.98
P04436 PHKA2-AS1-201ENST00000439295 597 ntTSL 3 BASIC8.93□□□□□ -0.98
P04436 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC8.93□□□□□ -0.98
P04436 AL662795.1-201ENST00000448756 634 ntBASIC8.93□□□□□ -0.98
P04436 AC073551.1-201ENST00000450741 834 ntBASIC8.93□□□□□ -0.98
P04436 BX842568.2-201ENST00000453595 1230 ntBASIC8.93□□□□□ -0.98
P04436 MED27-204ENST00000474263 762 ntTSL 2 BASIC8.93□□□□□ -0.98
P04436 ZBED5-AS1-201ENST00000501079 1071 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC8.93□□□□□ -0.98
P04436 RNA5SP409-201ENST00000516815 109 ntBASIC8.93□□□□□ -0.98
P04436 RNU2-24P-201ENST00000516830 143 ntBASIC8.93□□□□□ -0.98
P04436 LINC02219-201ENST00000520762 454 ntTSL 2 BASIC8.93□□□□□ -0.98
P04436 AP000424.1-202ENST00000523831 331 ntTSL 2 BASIC8.93□□□□□ -0.98
P04436 AC124276.2-201ENST00000527997 550 ntTSL 3 BASIC8.93□□□□□ -0.98
P04436 AP003031.1-201ENST00000534354 758 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 AC136443.3-201ENST00000546674 676 ntBASIC8.93□□□□□ -0.98
P04436 LINC01405-204ENST00000553177 524 ntTSL 4 BASIC8.93□□□□□ -0.98
P04436 AC007749.1-201ENST00000564299 585 ntBASIC8.93□□□□□ -0.98
P04436 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC8.93□□□□□ -0.98
P04436 AC016590.2-201ENST00000592319 375 ntTSL 3 BASIC8.93□□□□□ -0.98
P04436 OR7E108P-201ENST00000605227 991 ntBASIC8.93□□□□□ -0.98
P04436 MIR6744-201ENST00000619480 66 ntBASIC8.93□□□□□ -0.98
P04436 LINC00969-266ENST00000626156 683 ntTSL 5 BASIC8.93□□□□□ -0.98
P04436 AC068631.1-208ENST00000626649 667 ntTSL 5 BASIC8.93□□□□□ -0.98
P04436 AC068631.1-207ENST00000630315 821 ntTSL 5 BASIC8.93□□□□□ -0.98
P04436 AC106774.9-201ENST00000638668 597 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
P04436 MOV10L1-210ENST00000545383 3889 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 PPP2R3C-213ENST00000555644 1347 ntTSL 2 BASIC8.93□□□□□ -0.98
P04436 MAOA-201ENST00000338702 4015 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 ADGRG1-216ENST00000562631 4042 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
P04436 FCGR2C-211ENST00000543859 1507 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
P04436 DNAJB13-205ENST00000543947 1779 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 AL356961.1-201ENST00000567967 1923 ntBASIC8.93□□□□□ -0.98
P04436 ZNF561-202ENST00000326044 2017 ntTSL 2 BASIC8.93□□□□□ -0.98
P04436 CCDC13-AS1-201ENST00000418161 2049 ntTSL 2 BASIC8.93□□□□□ -0.98
P04436 LRRTM4-202ENST00000409093 2247 ntAPPRIS P3 TSL 2 BASIC8.93□□□□□ -0.98
P04436 TMBIM4-209ENST00000544599 2240 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 POTEA-201ENST00000519951 2268 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 HSH2D-208ENST00000616645 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 ZNF223-201ENST00000434772 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 EYA3-202ENST00000373864 2459 ntTSL 5 BASIC8.93□□□□□ -0.98
P04436 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC8.93□□□□□ -0.98
P04436 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
P04436 KBTBD12-204ENST00000407609 4302 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P04436 RRP12-203ENST00000414986 4242 ntAPPRIS ALT1 TSL 2 BASIC8.92□□□□□ -0.98
P04436 ARL1-201ENST00000261636 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P04436 AC016168.3-201ENST00000625040 3246 ntBASIC8.92□□□□□ -0.98
P04436 ZNF559-206ENST00000587557 2991 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
P04436 ZNF181-201ENST00000392232 2791 ntTSL 5 BASIC8.92□□□□□ -0.98
P04436 ZNF565-202ENST00000355114 2519 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
P04436 PIK3R1-216ENST00000523872 2473 ntTSL 2 BASIC8.92□□□□□ -0.98
P04436 CNR1-206ENST00000549890 2122 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
P04436 LIPH-202ENST00000424591 2065 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P04436 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
P04436 ELP3-218ENST00000524103 1914 ntTSL 2 BASIC8.92□□□□□ -0.98
P04436 IL17A-201ENST00000340057 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P04436 RBMY1A1-204ENST00000439108 1879 ntAPPRIS P5 TSL 1 (best) BASIC8.92□□□□□ -0.98
P04436 APOBEC3G-201ENST00000407997 1834 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P04436 SEPT4-206ENST00000457347 1795 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
P04436 AC139700.1-201ENST00000605810 1540 ntBASIC8.92□□□□□ -0.98
P04436 ZSCAN25-204ENST00000394152 4349 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
P04436 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
P04436 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P04436 ZNF662-204ENST00000440367 4099 ntTSL 2 BASIC8.92□□□□□ -0.98
P04436 MND1-201ENST00000240488 968 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P04436 CXCL13-201ENST00000286758 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
P04436 SYN3-201ENST00000332840 972 ntTSL 5 BASIC8.92□□□□□ -0.98
P04436 TRBV20-1-201ENST00000390394 413 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
P04436 IGHV1-46-201ENST00000390622 655 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
P04436 MCF2L-206ENST00000397021 576 ntTSL 2 BASIC8.92□□□□□ -0.98
P04436 SPAG11B-205ENST00000398462 655 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
P04436 LINC00475-206ENST00000434944 796 ntTSL 3 BASIC8.92□□□□□ -0.98
P04436 AC141930.1-201ENST00000438247 786 ntTSL 4 BASIC8.92□□□□□ -0.98
P04436 AL662791.2-201ENST00000455287 596 ntBASIC8.92□□□□□ -0.98
P04436 RN7SL120P-201ENST00000463924 296 ntBASIC8.92□□□□□ -0.98
P04436 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC8.92□□□□□ -0.98
P04436 AC008663.3-201ENST00000520300 457 ntTSL 3 BASIC8.92□□□□□ -0.98
P04436 RPSAP74-201ENST00000522047 393 ntBASIC8.92□□□□□ -0.98
P04436 AC023194.3-201ENST00000522679 277 ntTSL 3 BASIC8.92□□□□□ -0.98
P04436 AC106788.1-202ENST00000548889 1212 ntBASIC8.92□□□□□ -0.98
P04436 AL132639.1-201ENST00000553698 475 ntBASIC8.92□□□□□ -0.98
P04436 AC105109.1-201ENST00000556012 1115 ntBASIC8.92□□□□□ -0.98
P04436 LINC01579-206ENST00000556928 657 ntTSL 3 BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms