Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 DMRTC1B-202ENST00000373532 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 RPL35P2-201ENST00000402419 363 ntBASIC10.35□□□□□ -0.75
LMO3Q8TAP4 SRP68P3-201ENST00000416871 344 ntBASIC10.35□□□□□ -0.75
LMO3Q8TAP4 Z93930.2-205ENST00000422972 409 ntTSL 2 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 TMEM256P2-201ENST00000440241 341 ntBASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AL031597.1-201ENST00000447383 432 ntBASIC10.35□□□□□ -0.75
LMO3Q8TAP4 IGHV3-64-201ENST00000454421 431 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 RN7SL320P-201ENST00000484133 295 ntBASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AC106795.2-202ENST00000507072 551 ntTSL 5 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AC063980.1-201ENST00000514282 414 ntTSL 3 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 ST13P10-201ENST00000526466 1082 ntBASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 DNM1P49-201ENST00000564895 474 ntBASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AC010531.3-201ENST00000569147 513 ntTSL 4 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AC009133.1-204ENST00000569809 967 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AC005580.1-203ENST00000591926 503 ntTSL 4 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 FLT3LG-203ENST00000594009 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 GNAL-210ENST00000602628 1038 ntTSL 2 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AL356299.2-201ENST00000609218 586 ntTSL 4 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AL031587.4-201ENST00000609265 691 ntBASIC10.35□□□□□ -0.75
LMO3Q8TAP4 EDRF1-AS1-207ENST00000610534 706 ntTSL 5 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 LINC01730-201ENST00000613868 843 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AL121955.1-201ENST00000620852 303 ntBASIC10.35□□□□□ -0.75
LMO3Q8TAP4 LINC00710-218ENST00000634614 1166 ntTSL 5 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AL603840.1-202ENST00000634769 583 ntTSL 5 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 PSMA3-AS1-204ENST00000554360 2475 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 AC012409.5-201ENST00000624746 3424 ntBASIC10.35□□□□□ -0.75
LMO3Q8TAP4 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 HMMR-201ENST00000353866 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 GABRB3-203ENST00000400188 1900 ntTSL 2 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 EXD2-202ENST00000409014 3404 ntTSL 2 BASIC10.35□□□□□ -0.75
LMO3Q8TAP4 NFYC-203ENST00000372652 2363 ntTSL 2 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 C17orf75-201ENST00000225805 4581 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 DNAJC24-202ENST00000465995 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 CYP17A1-207ENST00000639393 1684 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC026356.2-201ENST00000614539 1796 ntBASIC10.34□□□□□ -0.75
LMO3Q8TAP4 EREG-201ENST00000244869 4619 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 CAVIN2-201ENST00000304141 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 RBMS3-209ENST00000452462 1547 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC024610.2-204ENST00000637478 2867 ntTSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 HOXA1-201ENST00000343060 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 NDUFS1-203ENST00000432169 2080 ntTSL 2 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 FAF1-201ENST00000371778 1643 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 TMEM45B-202ENST00000524567 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 ZNF2-205ENST00000622059 1624 ntTSL 2 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 PPP3CB-202ENST00000360663 3501 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 ISX-202ENST00000404699 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 MAPK10-346ENST00000641737 2633 ntAPPRIS P2 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 RPL21-204ENST00000326092 641 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 RNA5SP298-201ENST00000364991 111 ntBASIC10.34□□□□□ -0.75
LMO3Q8TAP4 NUDT5-201ENST00000378927 1258 ntTSL 2 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 TRBV20-1-201ENST00000390394 413 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AL627402.1-201ENST00000405276 735 ntBASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AL772155.1-201ENST00000431077 347 ntTSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AL139142.1-201ENST00000431459 677 ntTSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 RPL3P12-201ENST00000436852 1208 ntBASIC10.34□□□□□ -0.75
LMO3Q8TAP4 CCR5-202ENST00000445772 1292 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC006978.1-201ENST00000496846 1234 ntBASIC10.34□□□□□ -0.75
LMO3Q8TAP4 USP32P2-204ENST00000508093 1174 ntBASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC025174.1-201ENST00000511758 295 ntTSL 3 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC022784.6-205ENST00000518619 807 ntTSL 3 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC016877.2-201ENST00000522128 1069 ntBASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 MBP-228ENST00000527041 582 ntTSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC009119.3-201ENST00000562835 388 ntTSL 3 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 ELOCP2-201ENST00000566760 332 ntBASIC10.34□□□□□ -0.75
LMO3Q8TAP4 PITPNC1-204ENST00000581322 1124 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC005154.1-223ENST00000584372 547 ntTSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC010524.1-201ENST00000596488 494 ntTSL 3 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AL391094.1-201ENST00000612442 966 ntBASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC012593.1-216ENST00000626183 444 ntTSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 KCNA2-203ENST00000485317 2496 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 SYNE1-230ENST00000495090 1907 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 ALPK1-205ENST00000504176 5203 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 KBTBD12-204ENST00000407609 4302 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 MOV10L1-205ENST00000395858 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AARS2-201ENST00000244571 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 TRPS1-211ENST00000520276 4083 ntTSL 2 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 PAX6-246ENST00000638963 1580 ntTSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 TTPAL-202ENST00000372904 6234 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 STEAP3-203ENST00000393110 4262 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 COL6A4P1-201ENST00000446690 2336 ntTSL 2 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 IGBP1-202ENST00000356413 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 LINC01838-201ENST00000595783 1657 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 NTPCR-201ENST00000366627 1762 ntTSL 3 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LMO3Q8TAP4 EYA1-206ENST00000388743 2199 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 ZNF10-203ENST00000426665 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 ARMC9-214ENST00000611582 5759 ntTSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 ZNF18-205ENST00000580613 2250 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms