Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 AC005332.7-201ENST00000614046 2005 ntBASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 AL049796.1-201ENST00000565336 1766 ntBASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01558Q9Y6Z2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 AL390961.4-201ENST00000623958 2535 ntBASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 AC104581.1-202ENST00000635932 2618 ntBASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 AC020907.5-201ENST00000624372 1936 ntBASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01558Q9Y6Z2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 AC006128.1-201ENST00000624704 1661 ntBASIC10.79□□□□□ -0.68
LINC01558Q9Y6Z2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms