Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.61■■□□□ 1.37
PTCH2Q9Y6C5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTCH2Q9Y6C5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTCH2Q9Y6C5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCH2Q9Y6C5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.59■■□□□ 1.37
PTCH2Q9Y6C5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
PTCH2Q9Y6C5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PTCH2Q9Y6C5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
PTCH2Q9Y6C5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PTCH2Q9Y6C5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.58■■□□□ 1.37
PTCH2Q9Y6C5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.58■■□□□ 1.37
PTCH2Q9Y6C5 RARRES2P10-201ENST00000564312 460 ntBASIC23.58■■□□□ 1.37
PTCH2Q9Y6C5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PTCH2Q9Y6C5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.58■■□□□ 1.37
PTCH2Q9Y6C5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.58■■□□□ 1.37
PTCH2Q9Y6C5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.36
PTCH2Q9Y6C5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 AC137767.1-201ENST00000602918 1920 ntBASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PTCH2Q9Y6C5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 AC105020.6-201ENST00000621523 1217 ntBASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 CYP21A1P-202ENST00000354927 1481 ntBASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.56■■□□□ 1.36
PTCH2Q9Y6C5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.55■■□□□ 1.36
PTCH2Q9Y6C5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.54■■□□□ 1.36
PTCH2Q9Y6C5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms