Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.45■□□□□ 0.7
RNF6Q9Y252 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.45■□□□□ 0.7
RNF6Q9Y252 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF6Q9Y252 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF6Q9Y252 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 AC007952.6-201ENST00000573168 2673 ntBASIC19.45■□□□□ 0.7
RNF6Q9Y252 AC003957.1-201ENST00000625108 2673 ntBASIC19.45■□□□□ 0.7
RNF6Q9Y252 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF6Q9Y252 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF6Q9Y252 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF6Q9Y252 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RNF6Q9Y252 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF6Q9Y252 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF6Q9Y252 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF6Q9Y252 HLA-L-209ENST00000420110 1011 ntBASIC19.44■□□□□ 0.7
RNF6Q9Y252 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF6Q9Y252 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.44■□□□□ 0.7
RNF6Q9Y252 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF6Q9Y252 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF6Q9Y252 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF6Q9Y252 OXCT2P1-201ENST00000447263 1535 ntBASIC19.44■□□□□ 0.7
RNF6Q9Y252 BX005040.4-201ENST00000637145 1518 ntBASIC19.44■□□□□ 0.7
RNF6Q9Y252 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF6Q9Y252 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RNF6Q9Y252 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF6Q9Y252 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF6Q9Y252 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF6Q9Y252 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF6Q9Y252 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF6Q9Y252 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF6Q9Y252 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF6Q9Y252 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF6Q9Y252 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF6Q9Y252 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF6Q9Y252 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF6Q9Y252 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.43■□□□□ 0.7
RNF6Q9Y252 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF6Q9Y252 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF6Q9Y252 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF6Q9Y252 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF6Q9Y252 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
RNF6Q9Y252 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
RNF6Q9Y252 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF6Q9Y252 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RNF6Q9Y252 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF6Q9Y252 AP004607.4-201ENST00000530158 1459 ntBASIC19.42■□□□□ 0.7
RNF6Q9Y252 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF6Q9Y252 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF6Q9Y252 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RNF6Q9Y252 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF6Q9Y252 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF6Q9Y252 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF6Q9Y252 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF6Q9Y252 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF6Q9Y252 AC079089.2-201ENST00000531211 1277 ntBASIC19.42■□□□□ 0.7
RNF6Q9Y252 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF6Q9Y252 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF6Q9Y252 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF6Q9Y252 AC087239.1-201ENST00000622671 572 ntBASIC19.42■□□□□ 0.7
RNF6Q9Y252 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF6Q9Y252 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF6Q9Y252 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF6Q9Y252 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF6Q9Y252 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF6Q9Y252 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF6Q9Y252 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
RNF6Q9Y252 AC004854.2-201ENST00000608450 1441 ntBASIC19.42■□□□□ 0.7
RNF6Q9Y252 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF6Q9Y252 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF6Q9Y252 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF6Q9Y252 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF6Q9Y252 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RNF6Q9Y252 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF6Q9Y252 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF6Q9Y252 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF6Q9Y252 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF6Q9Y252 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF6Q9Y252 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RNF6Q9Y252 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF6Q9Y252 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF6Q9Y252 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF6Q9Y252 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RNF6Q9Y252 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF6Q9Y252 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF6Q9Y252 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF6Q9Y252 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF6Q9Y252 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF6Q9Y252 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RNF6Q9Y252 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RNF6Q9Y252 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF6Q9Y252 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms