Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 GUSBP5-202ENST00000510805 1989 ntBASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC31.09■■■□□ 2.57
SHANK2Q9UPX8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 UNC93B4-201ENST00000505679 747 ntBASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC31.08■■■□□ 2.57
SHANK2Q9UPX8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 SOX15-203ENST00000570788 1093 ntBASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 AL359736.2-201ENST00000621992 437 ntBASIC31.07■■■□□ 2.56
SHANK2Q9UPX8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 HES2-205ENST00000487437 968 ntTSL 3 BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 AC233263.1-201ENST00000578059 224 ntBASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 USP36-216ENST00000589424 970 ntTSL 5 BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SHANK2Q9UPX8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 ECEL1P1-201ENST00000373592 1742 ntBASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC31.05■■■□□ 2.56
SHANK2Q9UPX8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC31.04■■■□□ 2.56
SHANK2Q9UPX8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SHANK2Q9UPX8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SHANK2Q9UPX8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SHANK2Q9UPX8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SHANK2Q9UPX8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
SHANK2Q9UPX8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SHANK2Q9UPX8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
SHANK2Q9UPX8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms