Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
MKRN1Q9UHC7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
MKRN1Q9UHC7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
MKRN1Q9UHC7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
MKRN1Q9UHC7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.25■■□□□ 1.63
MKRN1Q9UHC7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.25■■□□□ 1.63
MKRN1Q9UHC7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC25.25■■□□□ 1.63
MKRN1Q9UHC7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
MKRN1Q9UHC7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.25■■□□□ 1.63
MKRN1Q9UHC7 AC068473.5-201ENST00000616428 2072 ntBASIC25.25■■□□□ 1.63
MKRN1Q9UHC7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.25■■□□□ 1.63
MKRN1Q9UHC7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
MKRN1Q9UHC7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 AC079834.2-201ENST00000609776 1949 ntBASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 TSPY7P-201ENST00000431358 1114 ntBASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MKRN1Q9UHC7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.23■■□□□ 1.63
MKRN1Q9UHC7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
MKRN1Q9UHC7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.23■■□□□ 1.63
MKRN1Q9UHC7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
MKRN1Q9UHC7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.23■■□□□ 1.63
MKRN1Q9UHC7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
MKRN1Q9UHC7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
MKRN1Q9UHC7 AC087499.1-201ENST00000418141 1075 ntBASIC25.23■■□□□ 1.63
MKRN1Q9UHC7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC25.23■■□□□ 1.63
MKRN1Q9UHC7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MKRN1Q9UHC7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 RN7SL471P-201ENST00000580476 299 ntBASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MKRN1Q9UHC7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.21■■□□□ 1.63
MKRN1Q9UHC7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
MKRN1Q9UHC7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
MKRN1Q9UHC7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
MKRN1Q9UHC7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
MKRN1Q9UHC7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
MKRN1Q9UHC7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
MKRN1Q9UHC7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
MKRN1Q9UHC7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
MKRN1Q9UHC7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
MKRN1Q9UHC7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.21■■□□□ 1.63
MKRN1Q9UHC7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
MKRN1Q9UHC7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
MKRN1Q9UHC7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 TMPOP1-202ENST00000424642 1267 ntBASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 FAM99A-202ENST00000538190 1989 ntBASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
MKRN1Q9UHC7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 KRT17P2-201ENST00000300992 1314 ntBASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MKRN1Q9UHC7 AC242852.2-201ENST00000615738 1807 ntBASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms