Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.02■□□□□ 0.79
SPHK1Q9NYA1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.02■□□□□ 0.79
SPHK1Q9NYA1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SPHK1Q9NYA1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SPHK1Q9NYA1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 AL121832.2-201ENST00000610979 668 ntBASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.01■□□□□ 0.79
SPHK1Q9NYA1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPHK1Q9NYA1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPHK1Q9NYA1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20■□□□□ 0.79
SPHK1Q9NYA1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPHK1Q9NYA1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20■□□□□ 0.79
SPHK1Q9NYA1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SPHK1Q9NYA1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SPHK1Q9NYA1 GPX1P1-201ENST00000388829 606 ntBASIC20■□□□□ 0.79
SPHK1Q9NYA1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20■□□□□ 0.79
SPHK1Q9NYA1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20■□□□□ 0.79
SPHK1Q9NYA1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20■□□□□ 0.79
SPHK1Q9NYA1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPHK1Q9NYA1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPHK1Q9NYA1 AC133552.2-202ENST00000575694 574 ntBASIC20■□□□□ 0.79
SPHK1Q9NYA1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20■□□□□ 0.79
SPHK1Q9NYA1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20■□□□□ 0.79
SPHK1Q9NYA1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20■□□□□ 0.79
SPHK1Q9NYA1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SPHK1Q9NYA1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 AC093787.1-201ENST00000450396 207 ntBASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 AL162412.1-201ENST00000567129 965 ntBASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 AC105036.2-201ENST00000569468 176 ntBASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 AC104771.1-201ENST00000603335 964 ntBASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 AL109923.1-201ENST00000618799 583 ntBASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.99■□□□□ 0.79
SPHK1Q9NYA1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 GUSBP6-202ENST00000438529 1198 ntBASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 RARRES2P4-201ENST00000514074 484 ntBASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 AF201337.1-201ENST00000520239 748 ntBASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 AL049796.1-201ENST00000565336 1766 ntBASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPHK1Q9NYA1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 AC069236.1-201ENST00000604339 616 ntBASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 OR10C1-204ENST00000622521 1039 ntBASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 AC008694.1-202ENST00000636953 945 ntBASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 AC007375.3-201ENST00000600936 2314 ntBASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
SPHK1Q9NYA1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms