Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPF1Q9NWY4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPF1Q9NWY4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 AL355802.2-201ENST00000402069 882 ntBASIC19.2■□□□□ 0.66
HPF1Q9NWY4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 AC069236.1-201ENST00000604339 616 ntBASIC19.2■□□□□ 0.66
HPF1Q9NWY4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPF1Q9NWY4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 SLC29A4P1-201ENST00000398760 971 ntBASIC19.19■□□□□ 0.66
HPF1Q9NWY4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 AC105036.2-201ENST00000569468 176 ntBASIC19.19■□□□□ 0.66
HPF1Q9NWY4 AC133552.2-202ENST00000575694 574 ntBASIC19.19■□□□□ 0.66
HPF1Q9NWY4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 AL591742.1-201ENST00000604433 565 ntBASIC19.19■□□□□ 0.66
HPF1Q9NWY4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.19■□□□□ 0.66
HPF1Q9NWY4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HPF1Q9NWY4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.17■□□□□ 0.66
HPF1Q9NWY4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
HPF1Q9NWY4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HPF1Q9NWY4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.17■□□□□ 0.66
HPF1Q9NWY4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.17■□□□□ 0.66
HPF1Q9NWY4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.17■□□□□ 0.66
HPF1Q9NWY4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPF1Q9NWY4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.17■□□□□ 0.66
HPF1Q9NWY4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPF1Q9NWY4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPF1Q9NWY4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.17■□□□□ 0.66
HPF1Q9NWY4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 TSPY6P-201ENST00000448518 926 ntBASIC19.16■□□□□ 0.66
HPF1Q9NWY4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 AL162412.1-201ENST00000567129 965 ntBASIC19.16■□□□□ 0.66
HPF1Q9NWY4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HPF1Q9NWY4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HPF1Q9NWY4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPF1Q9NWY4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
HPF1Q9NWY4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
HPF1Q9NWY4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.15■□□□□ 0.66
HPF1Q9NWY4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.15■□□□□ 0.66
HPF1Q9NWY4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HPF1Q9NWY4 OR10C1-204ENST00000622521 1039 ntBASIC19.15■□□□□ 0.66
HPF1Q9NWY4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.15■□□□□ 0.66
HPF1Q9NWY4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HPF1Q9NWY4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms