Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 FP700111.2-201ENST00000619190 1892 ntBASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 AC105233.4-201ENST00000642045 216 ntBASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 BX005040.4-201ENST00000637145 1518 ntBASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42SE2Q9NRR3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 AL391422.3-201ENST00000603791 2761 ntBASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 AC024257.2-201ENST00000549699 147 ntBASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC42SE2Q9NRR3 AC011484.1-201ENST00000377652 1995 ntBASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 AL136162.1-201ENST00000607711 1078 ntBASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms