Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 AC026185.1-201ENST00000445748 174 ntBASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 AC090192.1-201ENST00000517740 490 ntBASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 AC007322.1-201ENST00000426983 750 ntBASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 RAP2CP1-201ENST00000605103 478 ntBASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PRDM9Q9NQV7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRDM9Q9NQV7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PRDM9Q9NQV7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRDM9Q9NQV7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRDM9Q9NQV7 PKD1P6-201ENST00000343738 4769 ntBASIC19.58■□□□□ 0.73
PRDM9Q9NQV7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.58■□□□□ 0.72
PRDM9Q9NQV7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRDM9Q9NQV7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.58■□□□□ 0.72
PRDM9Q9NQV7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.58■□□□□ 0.72
PRDM9Q9NQV7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.58■□□□□ 0.72
PRDM9Q9NQV7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
PRDM9Q9NQV7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.58■□□□□ 0.72
PRDM9Q9NQV7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.58■□□□□ 0.72
PRDM9Q9NQV7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PRDM9Q9NQV7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.58■□□□□ 0.72
PRDM9Q9NQV7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.58■□□□□ 0.72
PRDM9Q9NQV7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRDM9Q9NQV7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 CNN2P6-201ENST00000439038 900 ntBASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 AC007322.4-201ENST00000509611 723 ntBASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM9Q9NQV7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM9Q9NQV7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM9Q9NQV7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM9Q9NQV7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM9Q9NQV7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM9Q9NQV7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.56■□□□□ 0.72
PRDM9Q9NQV7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM9Q9NQV7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.56■□□□□ 0.72
PRDM9Q9NQV7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PRDM9Q9NQV7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM9Q9NQV7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 AC011484.1-201ENST00000377652 1995 ntBASIC19.55■□□□□ 0.72
PRDM9Q9NQV7 AC005229.4-201ENST00000610085 2198 ntBASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms