Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HINT3Q9NQE9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HINT3Q9NQE9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.69■□□□□ 0.58
HINT3Q9NQE9 PCDHAC2-203ENST00000615316 3011 ntBASIC18.69■□□□□ 0.58
HINT3Q9NQE9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HINT3Q9NQE9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HINT3Q9NQE9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HINT3Q9NQE9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HINT3Q9NQE9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.69■□□□□ 0.58
HINT3Q9NQE9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HINT3Q9NQE9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HINT3Q9NQE9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.69■□□□□ 0.58
HINT3Q9NQE9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HINT3Q9NQE9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HINT3Q9NQE9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 AC020907.5-201ENST00000624372 1936 ntBASIC18.68■□□□□ 0.58
HINT3Q9NQE9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HINT3Q9NQE9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HINT3Q9NQE9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 AC005224.4-201ENST00000583262 1652 ntBASIC18.66■□□□□ 0.58
HINT3Q9NQE9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HINT3Q9NQE9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 BX005040.4-201ENST00000637145 1518 ntBASIC18.65■□□□□ 0.58
HINT3Q9NQE9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HINT3Q9NQE9 MIR572-201ENST00000384983 95 ntBASIC18.65■□□□□ 0.58
HINT3Q9NQE9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms