Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CSNK1G1Q9HCP0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1G1Q9HCP0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.78■■□□□ 1.08
CSNK1G1Q9HCP0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1G1Q9HCP0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.78■■□□□ 1.08
CSNK1G1Q9HCP0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.78■■□□□ 1.08
CSNK1G1Q9HCP0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1G1Q9HCP0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1G1Q9HCP0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1G1Q9HCP0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1G1Q9HCP0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.77■■□□□ 1.08
CSNK1G1Q9HCP0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1G1Q9HCP0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1G1Q9HCP0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CSNK1G1Q9HCP0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CSNK1G1Q9HCP0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.77■■□□□ 1.08
CSNK1G1Q9HCP0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.77■■□□□ 1.08
CSNK1G1Q9HCP0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.77■■□□□ 1.08
CSNK1G1Q9HCP0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.77■■□□□ 1.08
CSNK1G1Q9HCP0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.77■■□□□ 1.08
CSNK1G1Q9HCP0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CSNK1G1Q9HCP0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CSNK1G1Q9HCP0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 AL355802.2-201ENST00000402069 882 ntBASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 MIPEPP3-201ENST00000412105 444 ntBASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 AL138781.1-201ENST00000566567 1274 ntBASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 AC026310.3-201ENST00000625186 2373 ntBASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G1Q9HCP0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 AC073210.2-201ENST00000430369 194 ntBASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G1Q9HCP0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 AC011484.1-201ENST00000377652 1995 ntBASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G1Q9HCP0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CSNK1G1Q9HCP0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G1Q9HCP0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms