Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
BRF2Q9HAW0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 AL157384.1-201ENST00000445995 2473 ntBASIC19.82■□□□□ 0.76
BRF2Q9HAW0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 AC004854.2-201ENST00000608450 1441 ntBASIC19.82■□□□□ 0.76
BRF2Q9HAW0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
BRF2Q9HAW0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
BRF2Q9HAW0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF2Q9HAW0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF2Q9HAW0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF2Q9HAW0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.81■□□□□ 0.76
BRF2Q9HAW0 SLC7A5P2-201ENST00000553010 536 ntBASIC19.81■□□□□ 0.76
BRF2Q9HAW0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.81■□□□□ 0.76
BRF2Q9HAW0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF2Q9HAW0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF2Q9HAW0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRF2Q9HAW0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.8■□□□□ 0.76
BRF2Q9HAW0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF2Q9HAW0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRF2Q9HAW0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.8■□□□□ 0.76
BRF2Q9HAW0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
BRF2Q9HAW0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
BRF2Q9HAW0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.8■□□□□ 0.76
BRF2Q9HAW0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.8■□□□□ 0.76
BRF2Q9HAW0 SLC7A5P1-201ENST00000568957 537 ntBASIC19.8■□□□□ 0.76
BRF2Q9HAW0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
BRF2Q9HAW0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.8■□□□□ 0.76
BRF2Q9HAW0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRF2Q9HAW0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRF2Q9HAW0 GABARAPL3-202ENST00000624044 1851 ntBASIC19.79■□□□□ 0.76
BRF2Q9HAW0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 AP005212.1-201ENST00000581547 1997 ntBASIC19.79■□□□□ 0.76
BRF2Q9HAW0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 KRT19P1-201ENST00000405746 1186 ntBASIC19.79■□□□□ 0.76
BRF2Q9HAW0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRF2Q9HAW0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRF2Q9HAW0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms