Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
DDX47Q9H0S4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX47Q9H0S4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.58■■□□□ 1.04
DDX47Q9H0S4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
DDX47Q9H0S4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 BX005040.4-201ENST00000637145 1518 ntBASIC21.57■■□□□ 1.04
DDX47Q9H0S4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 BX842568.3-201ENST00000418104 571 ntBASIC21.57■■□□□ 1.04
DDX47Q9H0S4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.57■■□□□ 1.04
DDX47Q9H0S4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 AC009237.3-201ENST00000393279 1427 ntBASIC21.56■■□□□ 1.04
DDX47Q9H0S4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX47Q9H0S4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 MIR4767-201ENST00000582827 78 ntBASIC21.55■■□□□ 1.04
DDX47Q9H0S4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
DDX47Q9H0S4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX47Q9H0S4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX47Q9H0S4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX47Q9H0S4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX47Q9H0S4 AC099778.1-201ENST00000568593 1911 ntBASIC21.53■■□□□ 1.04
DDX47Q9H0S4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX47Q9H0S4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX47Q9H0S4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX47Q9H0S4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX47Q9H0S4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX47Q9H0S4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 RNF165-205ENST00000588679 2904 ntBASIC21.52■■□□□ 1.04
DDX47Q9H0S4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 AC005224.4-201ENST00000583262 1652 ntBASIC21.52■■□□□ 1.04
DDX47Q9H0S4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX47Q9H0S4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms