Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COPS4Q9BT78 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 AC020907.5-201ENST00000624372 1936 ntBASIC18.96■□□□□ 0.63
COPS4Q9BT78 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.96■□□□□ 0.63
COPS4Q9BT78 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COPS4Q9BT78 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
COPS4Q9BT78 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.96■□□□□ 0.63
COPS4Q9BT78 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 AL138724.1-201ENST00000606771 1088 ntBASIC18.96■□□□□ 0.63
COPS4Q9BT78 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COPS4Q9BT78 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.96■□□□□ 0.63
COPS4Q9BT78 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
COPS4Q9BT78 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.96■□□□□ 0.63
COPS4Q9BT78 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
COPS4Q9BT78 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COPS4Q9BT78 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS4Q9BT78 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.95■□□□□ 0.62
COPS4Q9BT78 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS4Q9BT78 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS4Q9BT78 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.95■□□□□ 0.62
COPS4Q9BT78 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
COPS4Q9BT78 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COPS4Q9BT78 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS4Q9BT78 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
COPS4Q9BT78 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
COPS4Q9BT78 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS4Q9BT78 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS4Q9BT78 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.95■□□□□ 0.62
COPS4Q9BT78 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPS4Q9BT78 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPS4Q9BT78 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.94■□□□□ 0.62
COPS4Q9BT78 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPS4Q9BT78 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.94■□□□□ 0.62
COPS4Q9BT78 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.94■□□□□ 0.62
COPS4Q9BT78 AL034346.1-201ENST00000568244 1277 ntBASIC18.94■□□□□ 0.62
COPS4Q9BT78 AC010525.1-201ENST00000585559 441 ntBASIC18.94■□□□□ 0.62
COPS4Q9BT78 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.94■□□□□ 0.62
COPS4Q9BT78 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
COPS4Q9BT78 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.94■□□□□ 0.62
COPS4Q9BT78 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
COPS4Q9BT78 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPS4Q9BT78 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPS4Q9BT78 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COPS4Q9BT78 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPS4Q9BT78 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.93■□□□□ 0.62
COPS4Q9BT78 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPS4Q9BT78 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPS4Q9BT78 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.93■□□□□ 0.62
COPS4Q9BT78 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPS4Q9BT78 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.93■□□□□ 0.62
COPS4Q9BT78 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPS4Q9BT78 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.93■□□□□ 0.62
COPS4Q9BT78 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.93■□□□□ 0.62
COPS4Q9BT78 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPS4Q9BT78 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COPS4Q9BT78 AC112907.3-201ENST00000577781 2400 ntBASIC18.93■□□□□ 0.62
COPS4Q9BT78 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.93■□□□□ 0.62
COPS4Q9BT78 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.93■□□□□ 0.62
COPS4Q9BT78 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
COPS4Q9BT78 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.93■□□□□ 0.62
COPS4Q9BT78 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS4Q9BT78 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS4Q9BT78 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS4Q9BT78 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS4Q9BT78 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS4Q9BT78 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 AC011298.3-201ENST00000615796 283 ntBASIC18.92■□□□□ 0.62
COPS4Q9BT78 AC136469.2-201ENST00000623944 1028 ntBASIC18.92■□□□□ 0.62
COPS4Q9BT78 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS4Q9BT78 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS4Q9BT78 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS4Q9BT78 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
COPS4Q9BT78 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPS4Q9BT78 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS4Q9BT78 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS4Q9BT78 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPS4Q9BT78 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms