Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP2Q99959 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP2Q99959 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP2Q99959 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.49■□□□□ 0.71
PKP2Q99959 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP2Q99959 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PKP2Q99959 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.48■□□□□ 0.71
PKP2Q99959 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.48■□□□□ 0.71
PKP2Q99959 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.48■□□□□ 0.71
PKP2Q99959 AC010141.3-201ENST00000456659 717 ntBASIC19.48■□□□□ 0.71
PKP2Q99959 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP2Q99959 TCF3P1-201ENST00000423021 1937 ntBASIC19.48■□□□□ 0.71
PKP2Q99959 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PKP2Q99959 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.48■□□□□ 0.71
PKP2Q99959 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP2Q99959 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.48■□□□□ 0.71
PKP2Q99959 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.48■□□□□ 0.71
PKP2Q99959 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP2Q99959 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PKP2Q99959 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PKP2Q99959 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
PKP2Q99959 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.47■□□□□ 0.71
PKP2Q99959 AP000974.1-201ENST00000623909 2387 ntBASIC19.47■□□□□ 0.71
PKP2Q99959 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.47■□□□□ 0.71
PKP2Q99959 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP2Q99959 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP2Q99959 AL035685.1-201ENST00000636663 812 ntBASIC19.47■□□□□ 0.71
PKP2Q99959 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PKP2Q99959 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
PKP2Q99959 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PKP2Q99959 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PKP2Q99959 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.47■□□□□ 0.71
PKP2Q99959 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.47■□□□□ 0.71
PKP2Q99959 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP2Q99959 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP2Q99959 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PKP2Q99959 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PKP2Q99959 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP2Q99959 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.46■□□□□ 0.71
PKP2Q99959 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP2Q99959 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.46■□□□□ 0.71
PKP2Q99959 AC087239.1-201ENST00000622671 572 ntBASIC19.46■□□□□ 0.71
PKP2Q99959 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP2Q99959 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.46■□□□□ 0.71
PKP2Q99959 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.46■□□□□ 0.71
PKP2Q99959 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP2Q99959 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PKP2Q99959 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP2Q99959 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PKP2Q99959 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.45■□□□□ 0.7
PKP2Q99959 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.45■□□□□ 0.7
PKP2Q99959 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKP2Q99959 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PKP2Q99959 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP2Q99959 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP2Q99959 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PKP2Q99959 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.45■□□□□ 0.7
PKP2Q99959 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.45■□□□□ 0.7
PKP2Q99959 pRNA.6-201ENST00000610482 90 ntBASIC19.45■□□□□ 0.7
PKP2Q99959 pRNA.5-201ENST00000612139 90 ntBASIC19.45■□□□□ 0.7
PKP2Q99959 pRNA.11-201ENST00000618423 90 ntBASIC19.45■□□□□ 0.7
PKP2Q99959 pRNA.13-201ENST00000619112 90 ntBASIC19.45■□□□□ 0.7
PKP2Q99959 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP2Q99959 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP2Q99959 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.45■□□□□ 0.7
PKP2Q99959 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP2Q99959 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP2Q99959 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP2Q99959 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.44■□□□□ 0.7
PKP2Q99959 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.44■□□□□ 0.7
PKP2Q99959 AC125437.2-201ENST00000625180 2167 ntBASIC19.44■□□□□ 0.7
PKP2Q99959 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP2Q99959 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP2Q99959 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PKP2Q99959 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PKP2Q99959 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PKP2Q99959 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP2Q99959 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PKP2Q99959 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.44■□□□□ 0.7
PKP2Q99959 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PKP2Q99959 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP2Q99959 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.44■□□□□ 0.7
PKP2Q99959 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PKP2Q99959 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP2Q99959 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.44■□□□□ 0.7
PKP2Q99959 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP2Q99959 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PKP2Q99959 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PKP2Q99959 AL158211.5-201ENST00000623583 2518 ntBASIC19.44■□□□□ 0.7
PKP2Q99959 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP2Q99959 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP2Q99959 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP2Q99959 AC004408.2-201ENST00000623613 2777 ntBASIC19.43■□□□□ 0.7
PKP2Q99959 TNXA-203ENST00000507684 2038 ntBASIC19.43■□□□□ 0.7
PKP2Q99959 AC006455.2-201ENST00000429931 906 ntBASIC19.43■□□□□ 0.7
PKP2Q99959 BX664725.1-201ENST00000438252 379 ntBASIC19.43■□□□□ 0.7
PKP2Q99959 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.43■□□□□ 0.7
PKP2Q99959 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
PKP2Q99959 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP2Q99959 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms