Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21■□□□□ 0.95
PHOX2BQ99453 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHOX2BQ99453 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21■□□□□ 0.95
PHOX2BQ99453 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHOX2BQ99453 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.99■□□□□ 0.95
PHOX2BQ99453 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PHOX2BQ99453 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHOX2BQ99453 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.99■□□□□ 0.95
PHOX2BQ99453 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHOX2BQ99453 MMP23A-201ENST00000234610 1017 ntBASIC20.99■□□□□ 0.95
PHOX2BQ99453 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHOX2BQ99453 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.99■□□□□ 0.95
PHOX2BQ99453 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.99■□□□□ 0.95
PHOX2BQ99453 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.99■□□□□ 0.95
PHOX2BQ99453 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHOX2BQ99453 AC053503.5-201ENST00000601508 636 ntBASIC20.99■□□□□ 0.95
PHOX2BQ99453 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHOX2BQ99453 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHOX2BQ99453 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHOX2BQ99453 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHOX2BQ99453 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PHOX2BQ99453 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHOX2BQ99453 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHOX2BQ99453 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHOX2BQ99453 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PHOX2BQ99453 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHOX2BQ99453 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PHOX2BQ99453 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHOX2BQ99453 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHOX2BQ99453 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHOX2BQ99453 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
PHOX2BQ99453 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.98■□□□□ 0.95
PHOX2BQ99453 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.98■□□□□ 0.95
PHOX2BQ99453 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHOX2BQ99453 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHOX2BQ99453 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHOX2BQ99453 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHOX2BQ99453 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHOX2BQ99453 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.97■□□□□ 0.95
PHOX2BQ99453 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.97■□□□□ 0.95
PHOX2BQ99453 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PHOX2BQ99453 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.97■□□□□ 0.95
PHOX2BQ99453 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHOX2BQ99453 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHOX2BQ99453 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.97■□□□□ 0.95
PHOX2BQ99453 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHOX2BQ99453 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PHOX2BQ99453 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PHOX2BQ99453 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHOX2BQ99453 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PHOX2BQ99453 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
PHOX2BQ99453 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.97■□□□□ 0.95
PHOX2BQ99453 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.97■□□□□ 0.95
PHOX2BQ99453 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PHOX2BQ99453 C9orf163-202ENST00000624034 2573 ntBASIC20.96■□□□□ 0.95
PHOX2BQ99453 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHOX2BQ99453 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.96■□□□□ 0.95
PHOX2BQ99453 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PHOX2BQ99453 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PHOX2BQ99453 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHOX2BQ99453 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHOX2BQ99453 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHOX2BQ99453 DUSP8P3-201ENST00000399571 1760 ntBASIC20.96■□□□□ 0.95
PHOX2BQ99453 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHOX2BQ99453 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PHOX2BQ99453 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHOX2BQ99453 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PHOX2BQ99453 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.96■□□□□ 0.95
PHOX2BQ99453 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.96■□□□□ 0.95
PHOX2BQ99453 AC087388.1-201ENST00000571370 1112 ntBASIC20.96■□□□□ 0.95
PHOX2BQ99453 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.96■□□□□ 0.95
PHOX2BQ99453 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHOX2BQ99453 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHOX2BQ99453 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.96■□□□□ 0.95
PHOX2BQ99453 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHOX2BQ99453 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHOX2BQ99453 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.96■□□□□ 0.95
PHOX2BQ99453 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHOX2BQ99453 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
PHOX2BQ99453 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHOX2BQ99453 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PHOX2BQ99453 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.95■□□□□ 0.94
PHOX2BQ99453 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHOX2BQ99453 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.95■□□□□ 0.94
PHOX2BQ99453 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.95■□□□□ 0.94
PHOX2BQ99453 MTDHP1-201ENST00000605323 784 ntBASIC20.95■□□□□ 0.94
PHOX2BQ99453 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHOX2BQ99453 AC006557.6-201ENST00000623071 864 ntBASIC20.95■□□□□ 0.94
PHOX2BQ99453 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHOX2BQ99453 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHOX2BQ99453 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.95■□□□□ 0.94
PHOX2BQ99453 AL135905.2-201ENST00000584934 1404 ntBASIC20.95■□□□□ 0.94
PHOX2BQ99453 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHOX2BQ99453 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHOX2BQ99453 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PHOX2BQ99453 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHOX2BQ99453 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.94■□□□□ 0.94
PHOX2BQ99453 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.94■□□□□ 0.94
PHOX2BQ99453 AC145285.6-201ENST00000604632 637 ntBASIC20.94■□□□□ 0.94
PHOX2BQ99453 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms