Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMD4Q96H15 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.41■□□□□ 0.38
TIMD4Q96H15 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.41■□□□□ 0.38
TIMD4Q96H15 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.41■□□□□ 0.38
TIMD4Q96H15 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMD4Q96H15 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.41■□□□□ 0.38
TIMD4Q96H15 AC091799.1-201ENST00000422823 811 ntBASIC17.41■□□□□ 0.38
TIMD4Q96H15 GUSBP6-202ENST00000438529 1198 ntBASIC17.41■□□□□ 0.38
TIMD4Q96H15 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TIMD4Q96H15 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.41■□□□□ 0.38
TIMD4Q96H15 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.41■□□□□ 0.38
TIMD4Q96H15 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TIMD4Q96H15 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.41■□□□□ 0.38
TIMD4Q96H15 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.41■□□□□ 0.38
TIMD4Q96H15 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.41■□□□□ 0.38
TIMD4Q96H15 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMD4Q96H15 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMD4Q96H15 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMD4Q96H15 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMD4Q96H15 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMD4Q96H15 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.4■□□□□ 0.38
TIMD4Q96H15 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.4■□□□□ 0.38
TIMD4Q96H15 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.4■□□□□ 0.38
TIMD4Q96H15 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.4■□□□□ 0.38
TIMD4Q96H15 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TIMD4Q96H15 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.4■□□□□ 0.38
TIMD4Q96H15 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TIMD4Q96H15 AC007322.3-201ENST00000426526 701 ntBASIC17.4■□□□□ 0.38
TIMD4Q96H15 AC069152.1-201ENST00000438030 544 ntBASIC17.4■□□□□ 0.38
TIMD4Q96H15 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.4■□□□□ 0.38
TIMD4Q96H15 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.4■□□□□ 0.38
TIMD4Q96H15 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.4■□□□□ 0.38
TIMD4Q96H15 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.4■□□□□ 0.38
TIMD4Q96H15 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMD4Q96H15 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
TIMD4Q96H15 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TIMD4Q96H15 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.39■□□□□ 0.37
TIMD4Q96H15 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.39■□□□□ 0.37
TIMD4Q96H15 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMD4Q96H15 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMD4Q96H15 BX276092.2-201ENST00000417668 665 ntBASIC17.39■□□□□ 0.37
TIMD4Q96H15 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.39■□□□□ 0.37
TIMD4Q96H15 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMD4Q96H15 AC073210.2-201ENST00000430369 194 ntBASIC17.39■□□□□ 0.37
TIMD4Q96H15 AC093787.1-201ENST00000450396 207 ntBASIC17.39■□□□□ 0.37
TIMD4Q96H15 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.39■□□□□ 0.37
TIMD4Q96H15 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.39■□□□□ 0.37
TIMD4Q96H15 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMD4Q96H15 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMD4Q96H15 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMD4Q96H15 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TIMD4Q96H15 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMD4Q96H15 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TIMD4Q96H15 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMD4Q96H15 AC010980.2-201ENST00000587099 1412 ntBASIC17.38■□□□□ 0.37
TIMD4Q96H15 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TIMD4Q96H15 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMD4Q96H15 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMD4Q96H15 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.38■□□□□ 0.37
TIMD4Q96H15 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMD4Q96H15 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TIMD4Q96H15 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMD4Q96H15 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMD4Q96H15 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.38■□□□□ 0.37
TIMD4Q96H15 MIPEPP3-201ENST00000412105 444 ntBASIC17.38■□□□□ 0.37
TIMD4Q96H15 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.38■□□□□ 0.37
TIMD4Q96H15 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMD4Q96H15 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TIMD4Q96H15 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TIMD4Q96H15 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMD4Q96H15 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.37■□□□□ 0.37
TIMD4Q96H15 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TIMD4Q96H15 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.37■□□□□ 0.37
TIMD4Q96H15 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TIMD4Q96H15 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TIMD4Q96H15 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.37■□□□□ 0.37
TIMD4Q96H15 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.37■□□□□ 0.37
TIMD4Q96H15 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
TIMD4Q96H15 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.37■□□□□ 0.37
TIMD4Q96H15 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.37■□□□□ 0.37
TIMD4Q96H15 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.37■□□□□ 0.37
TIMD4Q96H15 AC092118.2-201ENST00000613495 667 ntBASIC17.37■□□□□ 0.37
TIMD4Q96H15 AC100791.3-201ENST00000617619 330 ntBASIC17.37■□□□□ 0.37
TIMD4Q96H15 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMD4Q96H15 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms