Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2E3Q969T4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.91■□□□□ 0.78
UBE2E3Q969T4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2E3Q969T4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.91■□□□□ 0.78
UBE2E3Q969T4 AC011484.1-201ENST00000377652 1995 ntBASIC19.91■□□□□ 0.78
UBE2E3Q969T4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.91■□□□□ 0.78
UBE2E3Q969T4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 AC243732.1-201ENST00000612648 864 ntBASIC19.9■□□□□ 0.78
UBE2E3Q969T4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2E3Q969T4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2E3Q969T4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2E3Q969T4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2E3Q969T4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2E3Q969T4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.89■□□□□ 0.77
UBE2E3Q969T4 RARRES2P6-201ENST00000567333 442 ntBASIC19.89■□□□□ 0.77
UBE2E3Q969T4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.89■□□□□ 0.77
UBE2E3Q969T4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 PLK5-205ENST00000642079 1969 ntBASIC19.88■□□□□ 0.77
UBE2E3Q969T4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 KRT18P11-201ENST00000435214 1283 ntBASIC19.88■□□□□ 0.77
UBE2E3Q969T4 KRT18P61-201ENST00000585825 1298 ntBASIC19.88■□□□□ 0.77
UBE2E3Q969T4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2E3Q969T4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 AC026271.2-201ENST00000428091 497 ntBASIC19.87■□□□□ 0.77
UBE2E3Q969T4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.87■□□□□ 0.77
UBE2E3Q969T4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms