Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SCAMP4Q969E2 AC083906.2-201ENST00000511578 360 ntBASIC20.64■□□□□ 0.89
SCAMP4Q969E2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.64■□□□□ 0.89
SCAMP4Q969E2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SCAMP4Q969E2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 GPX1P1-201ENST00000388829 606 ntBASIC20.62■□□□□ 0.89
SCAMP4Q969E2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 AL121832.2-201ENST00000610979 668 ntBASIC20.62■□□□□ 0.89
SCAMP4Q969E2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCAMP4Q969E2 AC007375.3-201ENST00000600936 2314 ntBASIC20.61■□□□□ 0.89
SCAMP4Q969E2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 AF201337.1-201ENST00000520239 748 ntBASIC20.61■□□□□ 0.89
SCAMP4Q969E2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 AL162412.1-201ENST00000567129 965 ntBASIC20.61■□□□□ 0.89
SCAMP4Q969E2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 AC133552.2-202ENST00000575694 574 ntBASIC20.61■□□□□ 0.89
SCAMP4Q969E2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.61■□□□□ 0.89
SCAMP4Q969E2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCAMP4Q969E2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.6■□□□□ 0.89
SCAMP4Q969E2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCAMP4Q969E2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCAMP4Q969E2 AC093787.1-201ENST00000450396 207 ntBASIC20.6■□□□□ 0.89
SCAMP4Q969E2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.6■□□□□ 0.89
SCAMP4Q969E2 AC105036.2-201ENST00000569468 176 ntBASIC20.6■□□□□ 0.89
SCAMP4Q969E2 AC104771.1-201ENST00000603335 964 ntBASIC20.6■□□□□ 0.89
SCAMP4Q969E2 AL109923.1-201ENST00000618799 583 ntBASIC20.6■□□□□ 0.89
SCAMP4Q969E2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCAMP4Q969E2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCAMP4Q969E2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
SCAMP4Q969E2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.6■□□□□ 0.89
SCAMP4Q969E2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCAMP4Q969E2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCAMP4Q969E2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCAMP4Q969E2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCAMP4Q969E2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SCAMP4Q969E2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCAMP4Q969E2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCAMP4Q969E2 AL049796.1-201ENST00000565336 1766 ntBASIC20.59■□□□□ 0.89
SCAMP4Q969E2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.59■□□□□ 0.89
SCAMP4Q969E2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCAMP4Q969E2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SCAMP4Q969E2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.59■□□□□ 0.89
SCAMP4Q969E2 RARRES2P4-201ENST00000514074 484 ntBASIC20.59■□□□□ 0.89
SCAMP4Q969E2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.59■□□□□ 0.89
SCAMP4Q969E2 AC069236.1-201ENST00000604339 616 ntBASIC20.59■□□□□ 0.89
SCAMP4Q969E2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
SCAMP4Q969E2 AC008694.1-202ENST00000636953 945 ntBASIC20.59■□□□□ 0.89
SCAMP4Q969E2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SCAMP4Q969E2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCAMP4Q969E2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCAMP4Q969E2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCAMP4Q969E2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCAMP4Q969E2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SCAMP4Q969E2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCAMP4Q969E2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCAMP4Q969E2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCAMP4Q969E2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SCAMP4Q969E2 CDV3P1-201ENST00000471403 739 ntBASIC20.58■□□□□ 0.89
SCAMP4Q969E2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms