Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.6■■□□□ 1.37
USP6NLQ92738 FAM210CP-201ENST00000445714 574 ntBASIC23.6■■□□□ 1.37
USP6NLQ92738 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
USP6NLQ92738 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.6■■□□□ 1.37
USP6NLQ92738 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
USP6NLQ92738 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP6NLQ92738 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.6■■□□□ 1.37
USP6NLQ92738 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
USP6NLQ92738 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.59■■□□□ 1.37
USP6NLQ92738 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
USP6NLQ92738 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
USP6NLQ92738 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
USP6NLQ92738 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
USP6NLQ92738 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
USP6NLQ92738 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
USP6NLQ92738 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
USP6NLQ92738 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
USP6NLQ92738 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.58■■□□□ 1.37
USP6NLQ92738 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
USP6NLQ92738 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.58■■□□□ 1.37
USP6NLQ92738 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
USP6NLQ92738 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
USP6NLQ92738 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
USP6NLQ92738 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
USP6NLQ92738 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.58■■□□□ 1.37
USP6NLQ92738 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.58■■□□□ 1.37
USP6NLQ92738 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
USP6NLQ92738 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
USP6NLQ92738 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.58■■□□□ 1.37
USP6NLQ92738 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.58■■□□□ 1.37
USP6NLQ92738 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
USP6NLQ92738 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
USP6NLQ92738 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.58■■□□□ 1.36
USP6NLQ92738 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
USP6NLQ92738 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.58■■□□□ 1.36
USP6NLQ92738 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
USP6NLQ92738 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
USP6NLQ92738 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
USP6NLQ92738 AC068473.5-201ENST00000616428 2072 ntBASIC23.57■■□□□ 1.36
USP6NLQ92738 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
USP6NLQ92738 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.57■■□□□ 1.36
USP6NLQ92738 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
USP6NLQ92738 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.57■■□□□ 1.36
USP6NLQ92738 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.57■■□□□ 1.36
USP6NLQ92738 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.57■■□□□ 1.36
USP6NLQ92738 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.57■■□□□ 1.36
USP6NLQ92738 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.57■■□□□ 1.36
USP6NLQ92738 AC105020.6-201ENST00000621523 1217 ntBASIC23.57■■□□□ 1.36
USP6NLQ92738 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
USP6NLQ92738 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.57■■□□□ 1.36
USP6NLQ92738 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.57■■□□□ 1.36
USP6NLQ92738 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
USP6NLQ92738 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
USP6NLQ92738 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.56■■□□□ 1.36
USP6NLQ92738 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
USP6NLQ92738 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
USP6NLQ92738 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
USP6NLQ92738 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
USP6NLQ92738 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.56■■□□□ 1.36
USP6NLQ92738 AC233702.5-201ENST00000584107 538 ntBASIC23.56■■□□□ 1.36
USP6NLQ92738 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
USP6NLQ92738 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
USP6NLQ92738 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
USP6NLQ92738 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
USP6NLQ92738 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
USP6NLQ92738 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
USP6NLQ92738 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
USP6NLQ92738 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.56■■□□□ 1.36
USP6NLQ92738 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
USP6NLQ92738 AC010542.4-201ENST00000563151 1910 ntBASIC23.55■■□□□ 1.36
USP6NLQ92738 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
USP6NLQ92738 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
USP6NLQ92738 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
USP6NLQ92738 AC012618.2-201ENST00000428058 849 ntBASIC23.55■■□□□ 1.36
USP6NLQ92738 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
USP6NLQ92738 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.55■■□□□ 1.36
USP6NLQ92738 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
USP6NLQ92738 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
USP6NLQ92738 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
USP6NLQ92738 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.55■■□□□ 1.36
USP6NLQ92738 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.55■■□□□ 1.36
USP6NLQ92738 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
USP6NLQ92738 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
USP6NLQ92738 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
USP6NLQ92738 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
USP6NLQ92738 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
USP6NLQ92738 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
USP6NLQ92738 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms