Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 AC097381.1-201ENST00000429019 1296 ntBASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 AL034346.1-201ENST00000568244 1277 ntBASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40AQ8WXH6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 AL358852.1-201ENST00000623174 1268 ntBASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40AQ8WXH6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB40AQ8WXH6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB40AQ8WXH6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40AQ8WXH6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAB40AQ8WXH6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms