Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 EEF1DP3-203ENST00000566025 782 ntBASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 AC008764.7-201ENST00000593779 1081 ntBASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A1Q8WWI5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC44A1Q8WWI5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
SLC44A1Q8WWI5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SLC44A1Q8WWI5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 TSPY26P-201ENST00000476365 1326 ntBASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A1Q8WWI5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 AC099791.1-201ENST00000416440 715 ntBASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 AC053503.5-201ENST00000601508 636 ntBASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 AC007952.6-201ENST00000573168 2673 ntBASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 AC003957.1-201ENST00000625108 2673 ntBASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 AP004607.4-201ENST00000530158 1459 ntBASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A1Q8WWI5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 AC008406.3-201ENST00000620001 1374 ntBASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 AC112907.3-201ENST00000577781 2400 ntBASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms