Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMIM4Q8WVI0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 OR2I1P-207ENST00000453522 948 ntBASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM4Q8WVI0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 pRNA.6-201ENST00000610482 90 ntBASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 pRNA.5-201ENST00000612139 90 ntBASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 pRNA.11-201ENST00000618423 90 ntBASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 pRNA.13-201ENST00000619112 90 ntBASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SMIM4Q8WVI0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SMIM4Q8WVI0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 TNXA-203ENST00000507684 2038 ntBASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMIM4Q8WVI0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 BX664725.1-201ENST00000438252 379 ntBASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 AP000974.1-201ENST00000623909 2387 ntBASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMIM4Q8WVI0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms