Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 AC010141.2-201ENST00000452426 721 ntBASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SMARCC2Q8TAQ2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 BID-214ENST00000617586 542 ntTSL 5 BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.29■■□□□ 1.48
SMARCC2Q8TAQ2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.28■■□□□ 1.48
SMARCC2Q8TAQ2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 AC080038.1-201ENST00000611274 1154 ntBASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
SMARCC2Q8TAQ2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 AC090192.1-201ENST00000517740 490 ntBASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 UBE2DNL-204ENST00000602536 740 ntBASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 AC121338.2-201ENST00000622535 1744 ntBASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SMARCC2Q8TAQ2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 FEM1AP1-201ENST00000431297 1995 ntBASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC2Q8TAQ2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms