Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNIP1Q8TAD8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 AC012306.2-201ENST00000609350 630 ntBASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.6■□□□□ 0.73
SNIP1Q8TAD8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 AL135905.2-201ENST00000584934 1404 ntBASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 RCN1P1-201ENST00000400413 996 ntBASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 AC245052.3-201ENST00000450182 901 ntBASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNIP1Q8TAD8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNIP1Q8TAD8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.58■□□□□ 0.73
SNIP1Q8TAD8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.58■□□□□ 0.73
SNIP1Q8TAD8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNIP1Q8TAD8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.58■□□□□ 0.73
SNIP1Q8TAD8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNIP1Q8TAD8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNIP1Q8TAD8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNIP1Q8TAD8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 AC133681.1-201ENST00000465482 601 ntBASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.58■□□□□ 0.72
SNIP1Q8TAD8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNIP1Q8TAD8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 AC124016.1-201ENST00000609552 612 ntBASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SNIP1Q8TAD8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms