Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 TPRG1LP1-201ENST00000598702 760 ntBASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.87■□□□□ 0.93
CFAP61Q8NHU2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 YBX1P1-201ENST00000445822 960 ntBASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CFAP61Q8NHU2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 LINC02228-203ENST00000641970 1355 ntBASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CFAP61Q8NHU2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 AC003102.1-202ENST00000563394 1796 ntBASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 LINC01006-201ENST00000333319 2292 ntBASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 AC055733.4-201ENST00000638462 1354 ntBASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CFAP61Q8NHU2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CFAP61Q8NHU2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CFAP61Q8NHU2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CFAP61Q8NHU2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CFAP61Q8NHU2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.82■□□□□ 0.92
CFAP61Q8NHU2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms