Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 C11orf96-202ENST00000528572 1834 ntBASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SPTSSBQ8NFR3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 AC139530.1-201ENST00000575312 1977 ntBASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC11.4□□□□□ -0.58
SPTSSBQ8NFR3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
SPTSSBQ8NFR3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SPTSSBQ8NFR3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 AL359504.2-201ENST00000605506 1601 ntBASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 AC012313.1-201ENST00000593393 3059 ntBASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SPTSSBQ8NFR3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 AL133373.2-201ENST00000623187 2828 ntBASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 AL161729.1-201ENST00000604104 1402 ntBASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 AC104581.1-202ENST00000635932 2618 ntBASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 AC020916.1-201ENST00000587762 1774 ntBASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 AC068418.2-201ENST00000577309 3703 ntBASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC11.38□□□□□ -0.59
SPTSSBQ8NFR3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms