Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RTL9Q8NET4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RTL9Q8NET4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RTL9Q8NET4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RTL9Q8NET4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RTL9Q8NET4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
RTL9Q8NET4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RTL9Q8NET4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
RTL9Q8NET4 AC116050.2-201ENST00000612102 1779 ntBASIC25.66■■□□□ 1.7
RTL9Q8NET4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RTL9Q8NET4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
RTL9Q8NET4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RTL9Q8NET4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.65■■□□□ 1.7
RTL9Q8NET4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RTL9Q8NET4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.65■■□□□ 1.7
RTL9Q8NET4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
RTL9Q8NET4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC25.65■■□□□ 1.7
RTL9Q8NET4 AC128676.1-201ENST00000454392 318 ntBASIC25.65■■□□□ 1.7
RTL9Q8NET4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.65■■□□□ 1.7
RTL9Q8NET4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
RTL9Q8NET4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.65■■□□□ 1.7
RTL9Q8NET4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
RTL9Q8NET4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTL9Q8NET4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTL9Q8NET4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTL9Q8NET4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTL9Q8NET4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RTL9Q8NET4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.64■■□□□ 1.7
RTL9Q8NET4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.64■■□□□ 1.7
RTL9Q8NET4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTL9Q8NET4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTL9Q8NET4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTL9Q8NET4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RTL9Q8NET4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
RTL9Q8NET4 AC026366.1-201ENST00000488803 879 ntBASIC25.64■■□□□ 1.69
RTL9Q8NET4 AC105020.6-201ENST00000621523 1217 ntBASIC25.64■■□□□ 1.69
RTL9Q8NET4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RTL9Q8NET4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RTL9Q8NET4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RTL9Q8NET4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RTL9Q8NET4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RTL9Q8NET4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.63■■□□□ 1.69
RTL9Q8NET4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.63■■□□□ 1.69
RTL9Q8NET4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RTL9Q8NET4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RTL9Q8NET4 AL596275.1-201ENST00000423464 877 ntBASIC25.63■■□□□ 1.69
RTL9Q8NET4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RTL9Q8NET4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RTL9Q8NET4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RTL9Q8NET4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.63■■□□□ 1.69
RTL9Q8NET4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RTL9Q8NET4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RTL9Q8NET4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RTL9Q8NET4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.63■■□□□ 1.69
RTL9Q8NET4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
RTL9Q8NET4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.62■■□□□ 1.69
RTL9Q8NET4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTL9Q8NET4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RTL9Q8NET4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RTL9Q8NET4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.62■■□□□ 1.69
RTL9Q8NET4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTL9Q8NET4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RTL9Q8NET4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.62■■□□□ 1.69
RTL9Q8NET4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.62■■□□□ 1.69
RTL9Q8NET4 AL158047.1-201ENST00000445918 881 ntBASIC25.62■■□□□ 1.69
RTL9Q8NET4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC25.62■■□□□ 1.69
RTL9Q8NET4 AP003097.1-201ENST00000530657 1135 ntBASIC25.62■■□□□ 1.69
RTL9Q8NET4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTL9Q8NET4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTL9Q8NET4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
RTL9Q8NET4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.62■■□□□ 1.69
RTL9Q8NET4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTL9Q8NET4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTL9Q8NET4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RTL9Q8NET4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
RTL9Q8NET4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTL9Q8NET4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTL9Q8NET4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTL9Q8NET4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTL9Q8NET4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC25.61■■□□□ 1.69
RTL9Q8NET4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.61■■□□□ 1.69
RTL9Q8NET4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.61■■□□□ 1.69
RTL9Q8NET4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC25.61■■□□□ 1.69
RTL9Q8NET4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RTL9Q8NET4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.61■■□□□ 1.69
RTL9Q8NET4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.61■■□□□ 1.69
RTL9Q8NET4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
RTL9Q8NET4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTL9Q8NET4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25.61■■□□□ 1.69
RTL9Q8NET4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RTL9Q8NET4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.61■■□□□ 1.69
RTL9Q8NET4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTL9Q8NET4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTL9Q8NET4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RTL9Q8NET4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC25.6■■□□□ 1.69
RTL9Q8NET4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.6■■□□□ 1.69
RTL9Q8NET4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.6■■□□□ 1.69
RTL9Q8NET4 AC008403.3-201ENST00000598924 454 ntBASIC25.6■■□□□ 1.69
RTL9Q8NET4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RTL9Q8NET4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms