Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNRF1Q8ND25 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 AC006015.1-201ENST00000429970 570 ntBASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 IKBKGP1-201ENST00000612193 1073 ntBASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNRF1Q8ND25 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.31■□□□□ 0.36
ZNRF1Q8ND25 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 RBM17P2-201ENST00000616397 1405 ntBASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNRF1Q8ND25 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 MFSD11-216ENST00000590393 1141 ntBASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 AC010536.3-201ENST00000620306 533 ntBASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 PLK5-205ENST00000642079 1969 ntBASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNRF1Q8ND25 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms