Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 PLK5-205ENST00000642079 1969 ntBASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM116Q8NCL8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 AL121603.2-201ENST00000557373 2117 ntBASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM116Q8NCL8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 MIR572-201ENST00000384983 95 ntBASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 MIR638-201ENST00000385237 100 ntBASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM116Q8NCL8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM116Q8NCL8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
TMEM116Q8NCL8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 AC121338.2-201ENST00000622535 1744 ntBASIC16.33■□□□□ 0.2
TMEM116Q8NCL8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms