Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 AL355472.2-201ENST00000422958 438 ntBASIC21.05■□□□□ 0.96
PGBD3Q8N328 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 AC245052.3-201ENST00000450182 901 ntBASIC21.05■□□□□ 0.96
PGBD3Q8N328 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 AC098590.1-201ENST00000468126 897 ntBASIC21.05■□□□□ 0.96
PGBD3Q8N328 CDV3P1-201ENST00000471403 739 ntBASIC21.05■□□□□ 0.96
PGBD3Q8N328 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 AC092053.2-201ENST00000640557 1818 ntBASIC21.05■□□□□ 0.96
PGBD3Q8N328 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD3Q8N328 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD3Q8N328 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD3Q8N328 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD3Q8N328 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PGBD3Q8N328 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD3Q8N328 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PGBD3Q8N328 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD3Q8N328 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
PGBD3Q8N328 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.04■□□□□ 0.96
PGBD3Q8N328 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD3Q8N328 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PGBD3Q8N328 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.04■□□□□ 0.96
PGBD3Q8N328 AC128676.1-201ENST00000454392 318 ntBASIC21.04■□□□□ 0.96
PGBD3Q8N328 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.04■□□□□ 0.96
PGBD3Q8N328 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.04■□□□□ 0.96
PGBD3Q8N328 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD3Q8N328 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
PGBD3Q8N328 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PGBD3Q8N328 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD3Q8N328 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.04■□□□□ 0.96
PGBD3Q8N328 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD3Q8N328 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD3Q8N328 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.03■□□□□ 0.96
PGBD3Q8N328 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PGBD3Q8N328 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.03■□□□□ 0.96
PGBD3Q8N328 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD3Q8N328 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD3Q8N328 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD3Q8N328 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.03■□□□□ 0.96
PGBD3Q8N328 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.03■□□□□ 0.96
PGBD3Q8N328 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD3Q8N328 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.03■□□□□ 0.96
PGBD3Q8N328 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.03■□□□□ 0.96
PGBD3Q8N328 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD3Q8N328 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD3Q8N328 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD3Q8N328 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
PGBD3Q8N328 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD3Q8N328 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD3Q8N328 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.03■□□□□ 0.96
PGBD3Q8N328 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PGBD3Q8N328 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD3Q8N328 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.03■□□□□ 0.96
PGBD3Q8N328 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PGBD3Q8N328 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PGBD3Q8N328 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PGBD3Q8N328 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PGBD3Q8N328 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PGBD3Q8N328 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.02■□□□□ 0.96
PGBD3Q8N328 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.02■□□□□ 0.96
PGBD3Q8N328 GCSHP5-201ENST00000443090 522 ntBASIC21.02■□□□□ 0.96
PGBD3Q8N328 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.02■□□□□ 0.96
PGBD3Q8N328 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PGBD3Q8N328 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PGBD3Q8N328 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PGBD3Q8N328 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PGBD3Q8N328 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.01■□□□□ 0.95
PGBD3Q8N328 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PGBD3Q8N328 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PGBD3Q8N328 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PGBD3Q8N328 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PGBD3Q8N328 KRT17P1-201ENST00000399211 1546 ntBASIC21.01■□□□□ 0.95
PGBD3Q8N328 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PGBD3Q8N328 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PGBD3Q8N328 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PGBD3Q8N328 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.01■□□□□ 0.95
PGBD3Q8N328 AC026366.1-201ENST00000488803 879 ntBASIC21.01■□□□□ 0.95
PGBD3Q8N328 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.01■□□□□ 0.95
PGBD3Q8N328 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PGBD3Q8N328 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PGBD3Q8N328 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PGBD3Q8N328 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PGBD3Q8N328 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PGBD3Q8N328 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PGBD3Q8N328 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21■□□□□ 0.95
PGBD3Q8N328 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21■□□□□ 0.95
PGBD3Q8N328 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PGBD3Q8N328 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PGBD3Q8N328 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PGBD3Q8N328 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PGBD3Q8N328 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms