Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL27A1Q8IZC6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL27A1Q8IZC6 SNORA78-201ENST00000459373 127 ntBASIC19.74■□□□□ 0.75
COL27A1Q8IZC6 Z99916.2-201ENST00000604037 246 ntBASIC19.74■□□□□ 0.75
COL27A1Q8IZC6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.74■□□□□ 0.75
COL27A1Q8IZC6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.74■□□□□ 0.75
COL27A1Q8IZC6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL27A1Q8IZC6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL27A1Q8IZC6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COL27A1Q8IZC6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL27A1Q8IZC6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.74■□□□□ 0.75
COL27A1Q8IZC6 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 C1orf229-201ENST00000623686 2258 ntBASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL27A1Q8IZC6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 AC124016.1-201ENST00000609552 612 ntBASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 AC116050.2-201ENST00000612102 1779 ntBASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
COL27A1Q8IZC6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 MIR718-201ENST00000390190 70 ntBASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 ECEL1P3-201ENST00000427961 737 ntBASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 RN7SL471P-201ENST00000580476 299 ntBASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 MTDHP1-201ENST00000605323 784 ntBASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL27A1Q8IZC6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL27A1Q8IZC6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 AC133681.1-201ENST00000465482 601 ntBASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 AL355075.4-201ENST00000554988 638 ntBASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 AL356652.1-201ENST00000615962 565 ntBASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.69■□□□□ 0.74
COL27A1Q8IZC6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms