Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEFF1Q8IYR6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 Z99916.2-201ENST00000604037 246 ntBASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEFF1Q8IYR6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
TMEFF1Q8IYR6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEFF1Q8IYR6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TMEFF1Q8IYR6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 AC007322.3-201ENST00000426526 701 ntBASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 AC010542.4-201ENST00000563151 1910 ntBASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEFF1Q8IYR6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 ECEL1P3-201ENST00000427961 737 ntBASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 SNORA78-201ENST00000459373 127 ntBASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
TMEFF1Q8IYR6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 AC069544.1-201ENST00000609399 999 ntBASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TMEFF1Q8IYR6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms