Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
DDX60Q8IY21 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX60Q8IY21 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
DDX60Q8IY21 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC25.82■■□□□ 1.72
DDX60Q8IY21 AC073648.6-201ENST00000641589 218 ntBASIC25.82■■□□□ 1.72
DDX60Q8IY21 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX60Q8IY21 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.82■■□□□ 1.72
DDX60Q8IY21 ECEL1P1-201ENST00000373592 1742 ntBASIC25.81■■□□□ 1.72
DDX60Q8IY21 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.81■■□□□ 1.72
DDX60Q8IY21 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
DDX60Q8IY21 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
DDX60Q8IY21 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.81■■□□□ 1.72
DDX60Q8IY21 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX60Q8IY21 SLC29A4P2-201ENST00000504749 1089 ntBASIC25.8■■□□□ 1.72
DDX60Q8IY21 AC233263.1-201ENST00000578059 224 ntBASIC25.8■■□□□ 1.72
DDX60Q8IY21 AC069544.1-201ENST00000609399 999 ntBASIC25.8■■□□□ 1.72
DDX60Q8IY21 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX60Q8IY21 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
DDX60Q8IY21 AC116050.2-201ENST00000612102 1779 ntBASIC25.8■■□□□ 1.72
DDX60Q8IY21 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.8■■□□□ 1.72
DDX60Q8IY21 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX60Q8IY21 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX60Q8IY21 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX60Q8IY21 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
DDX60Q8IY21 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DDX60Q8IY21 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
DDX60Q8IY21 AL158047.1-201ENST00000445918 881 ntBASIC25.8■■□□□ 1.72
DDX60Q8IY21 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
DDX60Q8IY21 AL589743.5-201ENST00000616611 1050 ntBASIC25.8■■□□□ 1.72
DDX60Q8IY21 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX60Q8IY21 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX60Q8IY21 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX60Q8IY21 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
DDX60Q8IY21 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX60Q8IY21 AC092368.3-202ENST00000574180 1591 ntBASIC25.79■■□□□ 1.72
DDX60Q8IY21 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
DDX60Q8IY21 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX60Q8IY21 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
DDX60Q8IY21 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX60Q8IY21 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC25.79■■□□□ 1.72
DDX60Q8IY21 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC25.79■■□□□ 1.72
DDX60Q8IY21 RHOD-202ENST00000532559 538 ntTSL 3 BASIC25.79■■□□□ 1.72
DDX60Q8IY21 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC25.79■■□□□ 1.72
DDX60Q8IY21 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
DDX60Q8IY21 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX60Q8IY21 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
DDX60Q8IY21 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX60Q8IY21 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
DDX60Q8IY21 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25.78■■□□□ 1.72
DDX60Q8IY21 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.78■■□□□ 1.72
DDX60Q8IY21 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.78■■□□□ 1.72
DDX60Q8IY21 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX60Q8IY21 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
DDX60Q8IY21 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
DDX60Q8IY21 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX60Q8IY21 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX60Q8IY21 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX60Q8IY21 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC25.78■■□□□ 1.72
DDX60Q8IY21 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX60Q8IY21 USP36-216ENST00000589424 970 ntTSL 5 BASIC25.78■■□□□ 1.72
DDX60Q8IY21 HLA-B-256ENST00000639848 1089 ntBASIC25.78■■□□□ 1.72
DDX60Q8IY21 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX60Q8IY21 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX60Q8IY21 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
DDX60Q8IY21 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
DDX60Q8IY21 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX60Q8IY21 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
DDX60Q8IY21 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC25.77■■□□□ 1.72
DDX60Q8IY21 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.77■■□□□ 1.72
DDX60Q8IY21 UNC93B4-201ENST00000505679 747 ntBASIC25.77■■□□□ 1.72
DDX60Q8IY21 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX60Q8IY21 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX60Q8IY21 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX60Q8IY21 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX60Q8IY21 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
DDX60Q8IY21 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
DDX60Q8IY21 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
DDX60Q8IY21 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC25.77■■□□□ 1.72
DDX60Q8IY21 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
DDX60Q8IY21 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC25.77■■□□□ 1.72
DDX60Q8IY21 AL359736.2-201ENST00000621992 437 ntBASIC25.77■■□□□ 1.72
DDX60Q8IY21 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.76■■□□□ 1.71
DDX60Q8IY21 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.76■■□□□ 1.71
DDX60Q8IY21 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.76■■□□□ 1.71
DDX60Q8IY21 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DDX60Q8IY21 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
DDX60Q8IY21 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
DDX60Q8IY21 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX60Q8IY21 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX60Q8IY21 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
DDX60Q8IY21 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC25.75■■□□□ 1.71
DDX60Q8IY21 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC25.75■■□□□ 1.71
DDX60Q8IY21 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX60Q8IY21 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
DDX60Q8IY21 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
DDX60Q8IY21 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.75■■□□□ 1.71
DDX60Q8IY21 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.75■■□□□ 1.71
DDX60Q8IY21 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX60Q8IY21 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DDX60Q8IY21 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms