Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 AC244015.2-201ENST00000616358 1861 ntBASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCN4BQ8IWT1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 FAM21FP-204ENST00000608637 956 ntBASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN4BQ8IWT1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 AC007322.3-201ENST00000426526 701 ntBASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SCN4BQ8IWT1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCN4BQ8IWT1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 AL355472.2-201ENST00000422958 438 ntBASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.85■■□□□ 1.09
SCN4BQ8IWT1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 AC073210.2-201ENST00000430369 194 ntBASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms