Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.59■□□□□ 0.57
LRFN4Q6PJG9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN4Q6PJG9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN4Q6PJG9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
LRFN4Q6PJG9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRFN4Q6PJG9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.59■□□□□ 0.57
LRFN4Q6PJG9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
LRFN4Q6PJG9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
LRFN4Q6PJG9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LRFN4Q6PJG9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRFN4Q6PJG9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.58■□□□□ 0.57
LRFN4Q6PJG9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRFN4Q6PJG9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRFN4Q6PJG9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN4Q6PJG9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 AC019069.1-201ENST00000610008 1333 ntBASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 AC097381.1-201ENST00000429019 1296 ntBASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN4Q6PJG9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 AC061975.6-201ENST00000579045 1553 ntBASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 AP004607.4-201ENST00000530158 1459 ntBASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN4Q6PJG9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 DUX4L2-201ENST00000561772 1275 ntBASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 AC138907.5-202ENST00000569484 235 ntBASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 AC104187.1-201ENST00000607510 612 ntBASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 MIR6821-201ENST00000617625 74 ntBASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 DUX4L6-201ENST00000626483 1275 ntBASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 DUX4L1-201ENST00000627662 1275 ntBASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 DUX4L8-201ENST00000629013 1275 ntBASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 DUX4L3-201ENST00000630187 1275 ntBASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 DUX4L7-201ENST00000630678 1275 ntBASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 DUX4L5-201ENST00000630834 1275 ntBASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN4Q6PJG9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms