Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 AC233702.5-201ENST00000584107 538 ntBASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 LINC01023-201ENST00000606054 436 ntBASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 C2orf69P4-201ENST00000565394 541 ntBASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.48■■□□□ 1.19
CNKSR3Q6P9H4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 RPS2P55-201ENST00000397318 883 ntBASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 AC107956.1-201ENST00000494359 873 ntBASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.47■■□□□ 1.19
CNKSR3Q6P9H4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 AC116050.2-201ENST00000612102 1779 ntBASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 MIR1224-201ENST00000408193 85 ntBASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 MTDHP1-201ENST00000605323 784 ntBASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CNKSR3Q6P9H4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CNKSR3Q6P9H4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CNKSR3Q6P9H4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 BX088651.1-201ENST00000540551 451 ntBASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.45■■□□□ 1.18
CNKSR3Q6P9H4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 KRT17P2-201ENST00000300992 1314 ntBASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 AC133681.1-201ENST00000465482 601 ntBASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 AC080038.3-201ENST00000623346 1952 ntBASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 AC127496.7-201ENST00000625110 1798 ntBASIC22.44■■□□□ 1.18
CNKSR3Q6P9H4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms