Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 AC092667.1-201ENST00000434301 2586 ntBASIC18.84■□□□□ 0.61
NIPAL3Q6P499 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 AC097381.1-201ENST00000429019 1296 ntBASIC18.84■□□□□ 0.61
NIPAL3Q6P499 RARRES2P6-201ENST00000567333 442 ntBASIC18.84■□□□□ 0.61
NIPAL3Q6P499 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.83■□□□□ 0.61
NIPAL3Q6P499 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.83■□□□□ 0.61
NIPAL3Q6P499 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NIPAL3Q6P499 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NIPAL3Q6P499 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NIPAL3Q6P499 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NIPAL3Q6P499 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NIPAL3Q6P499 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.83■□□□□ 0.6
NIPAL3Q6P499 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NIPAL3Q6P499 MIR6821-201ENST00000617625 74 ntBASIC18.83■□□□□ 0.6
NIPAL3Q6P499 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPAL3Q6P499 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPAL3Q6P499 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NIPAL3Q6P499 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NIPAL3Q6P499 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPAL3Q6P499 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NIPAL3Q6P499 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.83■□□□□ 0.6
NIPAL3Q6P499 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NIPAL3Q6P499 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.83■□□□□ 0.6
NIPAL3Q6P499 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 GABARAPL3-202ENST00000624044 1851 ntBASIC18.82■□□□□ 0.6
NIPAL3Q6P499 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 AP005212.1-201ENST00000581547 1997 ntBASIC18.82■□□□□ 0.6
NIPAL3Q6P499 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NIPAL3Q6P499 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.81■□□□□ 0.6
NIPAL3Q6P499 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 PLK5-205ENST00000642079 1969 ntBASIC18.81■□□□□ 0.6
NIPAL3Q6P499 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 AC087623.3-201ENST00000607047 1098 ntBASIC18.81■□□□□ 0.6
NIPAL3Q6P499 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 KRT87P-202ENST00000534226 1464 ntBASIC18.81■□□□□ 0.6
NIPAL3Q6P499 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NIPAL3Q6P499 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 AC073314.1-201ENST00000568729 2216 ntBASIC18.8■□□□□ 0.6
NIPAL3Q6P499 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NIPAL3Q6P499 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms