Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PPP4R3AQ6IN85 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.58■■□□□ 1.37
PPP4R3AQ6IN85 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.58■■□□□ 1.37
PPP4R3AQ6IN85 AC091799.1-201ENST00000422823 811 ntBASIC23.58■■□□□ 1.37
PPP4R3AQ6IN85 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.58■■□□□ 1.37
PPP4R3AQ6IN85 AC013268.1-206ENST00000638368 961 ntBASIC23.58■■□□□ 1.37
PPP4R3AQ6IN85 AC112229.1-201ENST00000639295 961 ntBASIC23.58■■□□□ 1.37
PPP4R3AQ6IN85 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.58■■□□□ 1.37
PPP4R3AQ6IN85 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
PPP4R3AQ6IN85 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PPP4R3AQ6IN85 AF106564.1-201ENST00000607058 2553 ntBASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PPP4R3AQ6IN85 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 CDCA4P2-201ENST00000441182 718 ntBASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 AC231657.2-201ENST00000624556 255 ntBASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 AC073111.5-205ENST00000641717 521 ntBASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
PPP4R3AQ6IN85 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R3AQ6IN85 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R3AQ6IN85 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R3AQ6IN85 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R3AQ6IN85 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.55■■□□□ 1.36
PPP4R3AQ6IN85 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R3AQ6IN85 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.55■■□□□ 1.36
PPP4R3AQ6IN85 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R3AQ6IN85 RAP2CP1-201ENST00000605103 478 ntBASIC23.55■■□□□ 1.36
PPP4R3AQ6IN85 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.55■■□□□ 1.36
PPP4R3AQ6IN85 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PPP4R3AQ6IN85 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PPP4R3AQ6IN85 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R3AQ6IN85 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R3AQ6IN85 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R3AQ6IN85 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.54■■□□□ 1.36
PPP4R3AQ6IN85 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.54■■□□□ 1.36
PPP4R3AQ6IN85 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R3AQ6IN85 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PPP4R3AQ6IN85 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PPP4R3AQ6IN85 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 AL162412.1-201ENST00000567129 965 ntBASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
PPP4R3AQ6IN85 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PPP4R3AQ6IN85 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PPP4R3AQ6IN85 AC005229.4-201ENST00000610085 2198 ntBASIC23.51■■□□□ 1.35
PPP4R3AQ6IN85 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms