Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDKAL1Q5VV42 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDKAL1Q5VV42 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.74■■□□□ 1.23
CDKAL1Q5VV42 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDKAL1Q5VV42 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDKAL1Q5VV42 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
CDKAL1Q5VV42 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.73■■□□□ 1.23
CDKAL1Q5VV42 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 AL354811.1-201ENST00000610286 706 ntBASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDKAL1Q5VV42 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDKAL1Q5VV42 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDKAL1Q5VV42 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.71■■□□□ 1.23
CDKAL1Q5VV42 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDKAL1Q5VV42 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDKAL1Q5VV42 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDKAL1Q5VV42 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.71■■□□□ 1.23
CDKAL1Q5VV42 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
CDKAL1Q5VV42 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.71■■□□□ 1.23
CDKAL1Q5VV42 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CDKAL1Q5VV42 AL121603.2-201ENST00000557373 2117 ntBASIC22.7■■□□□ 1.23
CDKAL1Q5VV42 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 RARRES2P11-201ENST00000635158 484 ntBASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDKAL1Q5VV42 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDKAL1Q5VV42 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.68■■□□□ 1.22
CDKAL1Q5VV42 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDKAL1Q5VV42 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDKAL1Q5VV42 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDKAL1Q5VV42 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.68■■□□□ 1.22
CDKAL1Q5VV42 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.68■■□□□ 1.22
CDKAL1Q5VV42 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDKAL1Q5VV42 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDKAL1Q5VV42 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms