Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 AC006128.1-201ENST00000624704 1661 ntBASIC20.1■□□□□ 0.81
SGO1Q5FBB7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SGO1Q5FBB7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SGO1Q5FBB7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SGO1Q5FBB7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SGO1Q5FBB7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SGO1Q5FBB7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SGO1Q5FBB7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
SGO1Q5FBB7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SGO1Q5FBB7 LINC01006-201ENST00000333319 2292 ntBASIC20.08■□□□□ 0.81
SGO1Q5FBB7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SGO1Q5FBB7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SGO1Q5FBB7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SGO1Q5FBB7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SGO1Q5FBB7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SGO1Q5FBB7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.08■□□□□ 0.8
SGO1Q5FBB7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.08■□□□□ 0.8
SGO1Q5FBB7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SGO1Q5FBB7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SGO1Q5FBB7 AC073130.3-201ENST00000624389 2278 ntBASIC20.07■□□□□ 0.8
SGO1Q5FBB7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.07■□□□□ 0.8
SGO1Q5FBB7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.07■□□□□ 0.8
SGO1Q5FBB7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SGO1Q5FBB7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SGO1Q5FBB7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SGO1Q5FBB7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SGO1Q5FBB7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.07■□□□□ 0.8
SGO1Q5FBB7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SGO1Q5FBB7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 AP004607.4-201ENST00000530158 1459 ntBASIC20.06■□□□□ 0.8
SGO1Q5FBB7 KRT87P-202ENST00000534226 1464 ntBASIC20.06■□□□□ 0.8
SGO1Q5FBB7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SGO1Q5FBB7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 AC092667.1-201ENST00000434301 2586 ntBASIC20.05■□□□□ 0.8
SGO1Q5FBB7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms