Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SNAI3Q3KNW1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 AC097381.1-201ENST00000429019 1296 ntBASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNAI3Q3KNW1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SNAI3Q3KNW1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 FEM1AP1-201ENST00000431297 1995 ntBASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.95■□□□□ 0.46
SNAI3Q3KNW1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 AC011484.1-201ENST00000377652 1995 ntBASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 AC245052.3-201ENST00000450182 901 ntBASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 AC087623.3-201ENST00000607047 1098 ntBASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNAI3Q3KNW1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms