Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 AC007322.3-201ENST00000426526 701 ntBASIC17.7■□□□□ 0.42
EFNB3Q15768 AC098934.4-201ENST00000564127 592 ntBASIC17.7■□□□□ 0.42
EFNB3Q15768 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.7■□□□□ 0.42
EFNB3Q15768 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.7■□□□□ 0.42
EFNB3Q15768 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
EFNB3Q15768 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.7■□□□□ 0.42
EFNB3Q15768 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EFNB3Q15768 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.69■□□□□ 0.42
EFNB3Q15768 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.69■□□□□ 0.42
EFNB3Q15768 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.69■□□□□ 0.42
EFNB3Q15768 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.69■□□□□ 0.42
EFNB3Q15768 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.69■□□□□ 0.42
EFNB3Q15768 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.69■□□□□ 0.42
EFNB3Q15768 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.69■□□□□ 0.42
EFNB3Q15768 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.69■□□□□ 0.42
EFNB3Q15768 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
EFNB3Q15768 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EFNB3Q15768 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.68■□□□□ 0.42
EFNB3Q15768 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EFNB3Q15768 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
EFNB3Q15768 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.68■□□□□ 0.42
EFNB3Q15768 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EFNB3Q15768 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EFNB3Q15768 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
EFNB3Q15768 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EFNB3Q15768 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.68■□□□□ 0.42
EFNB3Q15768 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
EFNB3Q15768 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.68■□□□□ 0.42
EFNB3Q15768 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.68■□□□□ 0.42
EFNB3Q15768 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
EFNB3Q15768 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
EFNB3Q15768 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.68■□□□□ 0.42
EFNB3Q15768 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.68■□□□□ 0.42
EFNB3Q15768 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.67■□□□□ 0.42
EFNB3Q15768 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.67■□□□□ 0.42
EFNB3Q15768 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.67■□□□□ 0.42
EFNB3Q15768 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
EFNB3Q15768 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.67■□□□□ 0.42
EFNB3Q15768 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.67■□□□□ 0.42
EFNB3Q15768 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
EFNB3Q15768 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.67■□□□□ 0.42
EFNB3Q15768 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EFNB3Q15768 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNB3Q15768 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNB3Q15768 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNB3Q15768 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNB3Q15768 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNB3Q15768 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EFNB3Q15768 MCRIP2P1-201ENST00000394346 511 ntBASIC17.66■□□□□ 0.42
EFNB3Q15768 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.66■□□□□ 0.42
EFNB3Q15768 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.66■□□□□ 0.42
EFNB3Q15768 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.66■□□□□ 0.42
EFNB3Q15768 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.66■□□□□ 0.42
EFNB3Q15768 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.66■□□□□ 0.42
EFNB3Q15768 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
EFNB3Q15768 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.66■□□□□ 0.42
EFNB3Q15768 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.66■□□□□ 0.42
EFNB3Q15768 MYC-209ENST00000641252 345 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms